All Publications

by Martin Nowak

1989  1990  1991  1992  1993  1994  1995  1996  1997  1998  1999  2000  2001  2002   2003   2004  2005  2006  2007  2008  2009  2010  2011  2012  2013  2014  2015  2016  2017   2018  2019  2020

1989

1.         Nowak, M. A. &  Schuster, P. (1989). Error thresholds of replication in finite populations: Mutation frequencies and the onset of Muller’s ratchet. J. Theor. Biol. 137: 375-395. PMID: 2626057. DOI: 10.1016/S0022-5193(89)80036-0  PDF

2.         Nowak, M. A. & Sigmund, K. (1989). Game-dynamical aspects of the prisoner's dilemma. Appl. Math. Comput. 30: 191-213. DOI: 10.1016/0096-3003(89)90052-0  PDF

3.         Nowak, M. A. & Sigmund, K. (1989). Oscillations in the evolution of reciprocity. J. Theor. Biol. 137: 21-26. PMID: 2593672. DOI: 10.1016/S0022-5193(89)80146-8  PDF

 

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1990

4.         Nowak, M. A. (1990). An evolutionarily stable strategy may be inaccessible. J. Theor. Biol. 142: 237-241. PMID: 2352434. DOI: 10.1016/S0022-5193(05)80224-3  PDF

5.         Nowak, M. A. (1990). HIV mutation rate. Nature 347: 522. PMID: 2215679. DOI: 10.1038/347522a0  PDF

6.         Nowak, M. A. (1990). Stochastic strategies in the prisoner’s dilemma. Theor. Popul. Biol. 38: 93-112. DOI: 10.1016/0040-5809(90)90005-G  PDF

7.         Nowak, M. A., May, R. M. & Anderson, R. M. (1990). The evolutionary dynamics of HIV quasispecies and the development of immunodeficiency disease. AIDS 4: 1095-1103. DOI: 10.1097/00002030-199011000-00007  PDF 

8.         Nowak, M. A. & Sigmund, K. (1990). The evolution of stochastic strategies in the prisoner's dilemma. Acta Appl. Math. 20: 247-265. DOI: 10.1007/BF00049570  PDF

 

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1991

9.         Kwiatkowski, D. & Nowak, M. A. (1991). Periodic and chaotic host-parasite interactions in human malaria. Proc. Natl. Acad. Sci. U.S.A. 88: 5111-5113. PMID: 2052590. PMCID: PMC51821. DOI: 10.1073/pnas.88.12.5111  PDF

10.       Magurran, A.E. & Nowak, M. A.(1991). Another battle of the sexes: the consequences of sexual asymmetry in mating costs and predation risk in the guppy, Poecilia reticulata. Proc. Royal Soc. B. 246: 31-38. PMID: 1684666. DOI: 10.1098/rspb.1991.0121  PDF

11.       Nowak, M. A. (1991). The evolution of viruses. Competition between horizontal and vertical transmission of mobile genes. J. Theor. Biol. 150: 339-347. PMID: 1798331. DOI: 10.1016/S0022-5193(05)80433-3  PDF

12.       Nowak, M. A., Anderson, R. M., McLean, A. R., Wolfs, T. F. W., Goudsmit, J. & May, R. M. (1991). Antigenic diversity thresholds and the development of AIDS. Science 254: 963-969. DOI: 10.1126/science.1683006  PDF

13.       Nowak, M. A. & May, R. M. (1991). Mathematical biology of HIV infections: Antigenic variation and diversity threshold. Math. Biosci. 106: 1-21. PMID: 1802171. DOI: 10.1016/0025-5564(91)90037-J  PDF

14.       Nowak, M. A. & McLean, A. R. (1991). A mathematical model of vaccination against HIV to prevent development of AIDS. Proc. Royal Soc. B. 246: 141-146. DOI: 10.1098/rspb.1991.0136  PDF

 

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1992

15.       McLean, A. R. & Nowak, M. A.(1992). Competition between zidovudine sensitive and resistant strains of HIV. AIDS 6: 71-79. PMID: 1543568. DOI: 10.1097/00002030-199201000-00009  PDF

16.       McLean, A. R. & Nowak, M. A. (1992). Models of interactions between HIV and other pathogens. J. Theor. Biol. 155: 69-86. PMID: 1619952. DOI: 10.1016/S0022-5193(05)80549-1  PDF

17.       Nowak, M. A. (1992). Variability in HIV infections. J. Theor. Biol. 155: 1-20. PMID: 1619947. DOI: 10.1016/S0022-5193(05)80545-4  PDF           

18.       Nowak, M. A. (1992). What is a quasispecies? Trends Ecol. Evol. 7: 118-121. PMID: 21235976. DOI: 10.1016/0169-5347(92)90145-2  PDF

19.       Nowak, M. A. & May, A. R. (1992). Coexistence and competition in HIV infections. J. Theor. Biol. 159: 329-342. PMID: 1296094. DOI: 10.1016/S0022-5193(05)80728-3  PDF

20.       Nowak, M. A. & May,  R. M. (1992). Evolutionary games and spatial chaos. Nature 359: 826-829. DOI: 10.1038/359826a0  PDF

21.       Nowak, M. A. & Sigmund, K. (1992). Tit for tat in heterogeneous populations. Nature 355: 250-253. DOI: 10.1038/355250a0  PDF

22.       Nowak, M. A., Tarczy-Hornoch, K. & Austyn, J. M.(1992). The optimal number of major histocompatibility complex molecules in an individual. Proc. Natl. Acad. Sci. U.S.A. 89: 10896-10899. PMID: 1438295. PMCID: PMC50449. DOI: 10.1073/pnas.89.22.10896   PDF

23.       Payne, R. J. H, Nowak, M. A. & Blumberg, B. S. (1992). Analysis of a cellular model to account for the natural history of infection by the hepatitis B virus and its role in the development of primary hepatocellular carcinoma. J. Theor. Biol. 159: 215-240. DOI: 10.1016/S0022-5193(05)80703-9  PDF

24.       Sherratt, J. A. & Nowak, M. A. (1992). Oncogenes, anti-oncogenes and the immune response to cancer: A mathematical model. Proc. Royal Soc. B. 248: 261-271. DOI: 10.1098/rspb.1992.0071   PDF

 

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1993

25.       Nowak, M. A. & May, R. M. (1993). AIDS pathogenesis: Mathematical models of HIV and SIV infections. AIDS 7: S3-S18. PMID: 8363800. DOI: 10.1097/00002030-199301001-00002   PDF

26.       Nowak, M. A. & May, R. M. (1993). The spatial dilemmas of evolution. Int. J. Bifurc. Chaos. 3: 35-78. DOI: 10.1142/S0218127493000040  PDF

27.       Nowak, M. A. & McLean, A. R. (1993). Mathematical models for the pathogenesis of AIDS. In Mathematics Applied to Biology and Medicine, eds. J. Demongeot, V. Capasso. Winnipeg: Wuertz Publishing, 275-284.

28.       Nowak, M. A. & Sigmund, K. (1993). A strategy of win-stay, lose-shift that outperforms tit-for-tat in the Prisoner’s Dilemma game. Nature 364: 56-58. PMID: 8316296. DOI: 10.1038/364056a0 PDF

29.       Nowak, M. A. & Sigmund, K. (1993). Chaos and the evolution of cooperation. Proc. Natl. Acad. Sci. U.S.A. 90: 5091-5094. PMID: 8506355. PMCID: PMC46660. DOI: 10.1073/pnas.90.11.5091  PDF

 

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1994

30.       Berry, R. M. & Nowak, M.A. (1994). Defective escape mutants of HIV. J. Theor. Biol. 171: 387-395. PMID: 7869736. DOI: 10.1006/jtbi.1994.1242 PDF

31.       Bonhoeffer, S., & Nowak, M.A. (1994). Intra-host versus inter-host selection: Viral strategies of immune function impairment. Proc. Natl. Acad. Sci. U.S.A. 91: 8062-8066. PMID: 8058757. PMCID: PMC44545. DOI: 10.1073/pnas.91.17.8062  PDF

32.       Bonhoeffer, S. & Nowak, M.A. (1994). Mutation and the evolution of virulence. Proc. Royal Soc. B. 258: 133-140. DOI: 10.1098/rspb.1994.0153  PDF

33.       May, R. M. & Nowak, M.A. (1994). Superinfection, metapopulation dynamics, and the evolution of diversity. J. Theor. Biol. 170: 95-114. PMID: 7967636. DOI: 10.1006/jtbi.1994.1171  PDF

34.       Moxon, E. R., Rainey, P. B., Nowak, M. A. & Lenski, R. E. (1994). Adaptive evolution of highly mutable loci in pathogenic bacteria. Curr. Biol. 4: 24-33. PMID: 7922307. DOI: 10.1016/S0960-9822(00)00005-1  PDF

35.       Nowak, M. A. (1994). The evolutionary dynamics of HIV infections. In First European Congress of Mathematics: Paris, July 6-10, 1992, Vol. II, eds. A. Joseph, F. Mignot, F. Murat, B. Prum, R. Rentschler. Basel: Birkhauser, 311-326.  PDF

36.       Nowak, M. A., Bonhoeffer, S. & May, R. M. (1994). More spatial games. Int. J. Bifurc. Chaos 4: 33-56. DOI: 10.1142/S0218127494000046   PDF

37.       Nowak, M. A., Bonhoeffer, S. & May, R. M. (1994). Spatial games and the maintenance of cooperation. Proc. Natl. Acad. Sci. U.S.A. 91: 4877-4881. PMID: 8197150. PMCID: PMC43892. DOI: 10.1073/pnas.91.11.4877  PDF

38.       Nowak, M. A. & May, R. M. (1994). Superinfection and the evolution of parasite virulence. Proc. Royal Soc. B. 255: 81-89. PMID: 8153140. DOI: 10.1098/rspb.1994.0012  PDF

39.       Nowak, M. A. & Sigmund, K. (1994). The alternating Prisoner’s Dilemma. J. Theor. Biol. 168: 219-226. DOI: 10.1006/jtbi.1994.1101  PDF

40.       Payne, R. J. H., Nowak, M. A. & Blumberg, B. S. (1994). A cellular model to explain the pathogenesis of infection by the hepatitis B virus. Math. Biosci. 123: 25-58. PMID: 7949745. DOI: 10.1016/0025-5564(94)90017-5  PDF

41.       Tilman, D., May, R. M., Lehman, C. L. & Nowak, M.A.(1994). Habitat destruction and the extinction debt. Nature 371: 65-66. DOI: 10.1038/371065a0  PDF

 

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1995

42.       Bonhoeffer, S., Holmes, E.C & Nowak, M.A. (1995). Causes of HIV diversity. Nature 376: 125. PMID: 7603560. DOI: 10.1038/376125a0  PDF

43.       Bonhoeffer, S. & Nowak, M.A. (1995). Can live attenuated virus work as post-exposure treatment? Immunol. Today 16: 131-135. DOI: 10.1016/0167-5699(95)80129-4 PDF

44.       Lipsitch, M., Herre, E. A. & Nowak, M.A.(1995). Host population structure and the evolution of virulence: A “law of diminishing returns.” Evolution 49: 743-748. PMID: 28565133. DOI: 10.2307/2410327  PDF

45.       Lipsitch, M. & Nowak, M.A. (1995). The evolution of virulence in sexually transmitted HIV/AIDS. J. Theor. Biol. 174: 427-440. PMID: 7666673. DOI: 10.1006/jtbi.1995.0109  PDF

46.       Lipsitch, M., Nowak, M. A., Ebert, D., May, R. M. (1995). The population dynamics of vertically and horizontally transmitted parasites. Proc. Royal Soc. B. 260: 321-327. DOI: 10.1098/rspb.1995.0099  PDF

47.       May, R. M. Bonhoeffer, S. & Nowak, M.A. (1995). Spatial games and evolution of cooperation. In Advances in Artificial Life: Third European Conference on Artificial Life, Granada, Spain, June 4-6, 1995, eds. F. Moran, A. Moreno, J. J. Merelo, P. Chacon. Berlin: Springer, 749-759.  PDF

48.       May, R. M. & Nowak, M.A. (1995). Coinfection and the evolution of parasite virulence. Proc. Royal Soc. B. 261: 209-215. PMID: 7568274. DOI: 10.1098/rspb.1995.0138  PDF

49.       McMichael, A. J., Rowland-Jones, S., Klenerman, P. et al (1995). Epitope variation and t-cell recognition. J. Cell .Biochem. Suppl. 59 (S21A): 60.

50.       Nowak, M. A. (1995). AIDS pathogenesis: From models to viral dynamics in patients. J. Acquir. Immune Defic. Syndr. 10: S1-S5. PMID: 8595501. DOI: 10.1097/00042560-199510001-00002  PDF

51.       Nowak, M. A. (1995). Evolutionary dynamics of HIV infections. In Models for Infectious Human Diseases: Their Structure and Relation to Data, eds. V. Isham & G. Medley. Cambridge: Cambridge University Press.  PDF

52.       Nowak, M. A., Bonhoeffer, S., Loveday, C., Balfe, P., Semple, M., Kaye, S., Tenant-Flowers, M. & Tedder, R. (1995). HIV results in the frame: Results confirmed. Nature 375: 193. PMID: 7746311. DOI: 10.1038/375193a0  PDF

53.       Nowak, M. A., May, R. M., Phillips, R. E., Rowland-Jones, S., , Lalloo, D. G., McAdam, S., Klenerman, P., Köppe, B., Sigmund, K., Bangham, C. R. M. & McMichael, A. J. (1995). Antigenic oscillations and shifting immunodominance in HIV-1 infections. Nature 375: 606-611. PMID: 7791879. DOI: 10.1038/375606a0  PDF

54.       Nowak, M. A., May, R. M. &Sigmund,  K. (1995). Immune responses against multiple epitopes. J. Theor. Biol. 175: 325-353. PMID: 7475080. DOI: 10.1006/jtbi.1995.0146  PDF

55.       Nowak, M. A., May, R. M. & Sigmund, K. (1995). The arithmetics of mutual help. Sci. Am. 272: 76-81. PMID: 7761818. DOI: 10.1038/scientificamerican0695-76  PDF

56.       Nowak, M. A., McMichael, A. J. (1995). How HIV defeats the immune system. Sci. Am. 273: 58-65. PMID: 7652527. DOI: 10.1038/scientificamerican0895-58  PDF

57.       Nowak, M. A. & Sigmund, K. (1995). Invasion dynamics of the finitely repeated Prisoner's Dilemma. Games Econ. Behav. 11: 364-390. DOI: 10.1006/game.1995.1055  PDF

58.       Nowak, M. A., Sigmund, K. & El-Sedy, E. (1995). Automata, repeated games and noise. J. Math. Biol. 33: 703-722. DOI: 10.1007/BF00184645  PDF

59.       Wei, X., Ghosh, S. K., Taylor, M. E., Johnson, V. A. Emini, E. A., Deutsch, P., Arnaout, R. A., Bonhoeffer, S., Nowak, M. A., Hahn, B. H., Saag, M. S. & Shaw, G. M. (1995). Viral dynamics in human immunodeficiency virus type 1 infection. Nature 373: 117-122. PMID: 7529365. DOI: 10.1038/373117a0  PDF

 

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1996

60.       Antia, R., Nowak, M. A. & Anderson, R. M. (1996). Antigenic variation and the within-host dynamics of parasites. Proc. Natl. Acad. Sci. U.S.A. 93: 985-989. PMID: 8577773. PMCID: PMC40016. DOI: 10.1073/pnas.93.3.985  PDF

61.       Boerlijst, M. C., Bonhoeffer, S. & Nowak, M.A. (1996). Viral quasi-species and recombination. Proc. R. Soc. B. 263: 1577-1584. DOI: 10.1098/rspb.1996.0231  PDF

62.       Bonhoeffer, S., Herz, A. M. V., Boerlijst, M. C., Nee, S., Nowak, M. A. & May, R. M. (1996). Explaining "linguistic features" of noncoding DNA. Science 271: 14-15. PMID: 17798153. DOI: 10.1126/science.271.5245.14b  PDF

63.       Bonhoeffer, S., Herz, A. M. V., Boerlijst, M. C., Nee, S., Nowak, M. A. & May,  R. M. (1996). No signs of hidden language in noncoding DNA. Phys. Rev. Lett. 76: 1977. PMID: 10060572. DOI: 10.1103/PhysRevLett.76.1977  PDF

64.       Herz, A. V. M., Bonhoeffer, S., Anderson, R. M., May, R. M. & Nowak, M.A. (1996). Viral dynamics in vivo: Limitations on estimates of intracellular delay and virus decay. Proc. Natl. Acad. Sci. U.S.A. 93: 7247-7251. PMID: 8692977. PMCID: PMC38968. DOI: 10.1073/pnas.93.14.7247  PDF

65.       Klenerman. P., Phillips, R. E., Rinaldo, C. R., Wahl, L. M., Ogg, G., May, R. M., McMichael, A. J. & Nowak, M.A. (1996). Cytotoxic T lymphocytes and viral turnover in HIV type 1 infection. Proc. Natl. Acad. Sci. U.S.A. 93: 15323-15328. PMID: 8986810. PMCID: PMC26403. DOI: 10.1073/pnas.93.26.15323   PDF

66.       Lipsitch, M., Siller, S. & Nowak, M.A. (1996). The evolution of virulence in pathogens with vertical and horizontal transmission. Evolution 50: 1729-1741. PMID: 28565576. DOI: 10.2307/2410731  PDF

67.       McMichael, A.J., Goulder, P., Rowland-Jones, S., Nowak, M. A. & Philips, R. (1996). HIV escapes from cytotoxic lymphocytes. Immunology 89: 111.

68.       Nowak, M. A. (1996). Immune responses against multiple epitopes: A theory for immunodominance and antigenic variation. Semin. Virol. 7: 83-92. PMID: 7475080. DOI: 10.1006/smvy.1996.0010  PDF

69.       Nowak, M. A., Anderson, R. M., Boerlijst, M. C., Bonhoeffer, S., May, R. M. & McMichael, A. J. (1996). HIV-1 evolution and disease progression. Science 274: 1008-1011. PMID: 8966557. DOI: 10.1126/science.274.5289.1008  PDF

70.       Nowak, M. A. & Bangham, C. R. M. (1996). Population dynamics of immune responses to persistent viruses. Science 272: 74-79. PMID: 8600540. DOI: 10.1126/science.272.5258.74  PDF

71.       Nowak, M. A., Bonhoeffer, S., Hill, A. M., Boehme, R., Thomas, H. C. & McDade,  H. (1996). Viral dynamics in hepatitis B virus infection. Proc. Natl. Acad. Sci. U.S.A. 93: 4398-4402. PMID: 8633078. PMCID: PMC39549. DOI: 10.1073/pnas.93.9.4398  PDF

72.       Nowak, M. A., Bonhoeffer, S. & May, R. M. (1996). Reply to Robustness of cooperation, A. Mukherji, V. Rajan & J, Slagle. Nature 379: 126. DOI: 10.1038/379126a0  PDF

73.       Payne, R. J. H., Nowak, M. A. & Blumberg, B. S. (1996). The dynamics of hepatitis B virus infection. Proc. Natl. Acad. Sci. U.S.A. 93: 6542-6546. PMID: 8692852. PMCID: PMC39060. DOI: 10.1073/pnas.93.13.6542  PDF

74.       Stekel, D. J., Nowak, M. A. & Southwood, T. R. E. (1996). Prediction of future BSE spread. Nature 381: 119. PMID: 8610007. DOI: 10.1038/381119a0  PDF

75.       Tilman, D., Lehman, C., May, R. M. & Nowak, M. A.(1996). Reply to Species fragmentation or area loss? S. Budiansky. Nature 382: 216. DOI: 10.1038/382216a0  PDF 

 

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1997

76.       Bittner, B., Bonhoeffer, S. & Nowak, M. A. (1997). Virus load and antigenic diversity. Bull. Math. Biol. 59: 881-896. PMID: 9281903. DOI: 10.1016/S0092-8240(97)00034-7  PDF

77.       Boerlijst, M. C., Nowak, M. A. & Sigmund, K. (1997). Equal pay for all prisoners. Am. Math. Mon. 104:303-305. DOI: 10.2307/2974578  PDF

78.       Boerlijst, M. C., Nowak, M. A. & Sigmund, K. (1997). The logic of contrition. J. Theor. Biol. 185: 281-293. PMID: 9156081. DOI: 10.1006/jtbi.1996.0326  PDF

79.       Bonhoeffer, S., Coffin, J. M. & Nowak, M. A. (1997). Human immunodeficiency virus drug therapy and virus load. J. Virol. 71: 3275-3278. PMID: 9060694. PMCID: PMC191463 PDF

80.       Bonhoeffer, S., May, R. M., Shaw, G. M. & Nowak, M. A. (1997). Virus dynamics and drug therapy. Proc. Natl. Acad. Sci. U.S.A. 94: 6971-6976. PMID: 9192676. PMCID: PMC21269. DOI: 10.1073/pnas.94.13.6971  PDF

81.       Bonhoeffer, S. & Nowak, M. A. (1997). Pre-existence and emergence of drug resistance in HIV-1 infection. Proc. Royal Soc. B. 264: 631-637. PMID: 9178534. PMCID: PMC1688415. DOI: 10.1098/rspb.1997.0089  PDF

82.      Chun, T-W., Stuyver,, L., Mizell, S. B., Ehler, L. A., Mican, J. A. M., Baseler, M., Lloyd, A. L., Nowak, M. A. & Fauci, A. S. (1997). Presence of an inducible HIV-1 latent reservoir during highly active antiretroviral therapy. Proc. Natl. Acad. Sci. U.S.A. 94: 13193-13197. PMID: 9371822. PMCID: PMC24285. DOI: 10.1073/pnas.94.24.13193  PDF

83.       Cooke, J., Nowak, M. A., Boerlijst, M. C. & Maynard-Smith, J. (1997). Evolutionary origins and maintenance of redundant gene expression during metazoan development. Trends Genet. 13: 360-364. PMID: 9287491. DOI: http://dx.doi.org/10.1016/S0168-9525(97)01233-X  PDF

84.       Goulder P. J. R., Phillips, R. E., Colbert, R. A., McAdam, S., Ogg, G., Nowak, M. A., Giangrande, P., Luzzi, G., Morgan, B., Edwards, A., McMichael, A. J. & Rowland-Jones, S. (1997). Late escape from an immunodominant cytotoxic T-lymphocyte response associated with progression to AIDS. Nat. Med. 3:212-217. PMID: 9018241. DOI: 10.1038/nm0297-212  PDF

85.       Goulder P. J. R., Price, D., Nowak, M. A., Rowland-Jones, S., Phillips, R. & McMichael, A. (1997). Co-evolution of human immunodeficiency virus and cytotoxic T-lymphocyte responses. Immunol. Rev. 159:17-29. PMID: 9416500. DOI: 10.1111/j.1600-065X.1997.tb01004.x  PDF

86.       Arnaout, R. A., Nowak, M. A., Goldstein, S., Rossio, J. L., Kinter, A., Vasquez, G., Wiltrout, T. A., Brown, C., Schneider, D., Wahl, L., Lloyd, A. L., Williams, J., Elkins, W. R., Fauci, A. S. & Hirsch, V. M. (1997). The extent of early viral replication is a critical determinant of the natural history of simian immunodeficiency virus infection. J. Virol. 71: 9508-9514. PMID: 9371613. PMCID: PMC230257  PDF

87.       May, R. M., Stekel, D. J. & Nowak, M. A. (1997). Antigenic diversity thresholds and hazard functions. Math. Biosci. 139: 59-68. PMID: 9111779. DOI: 10.1016/S0025-5564(96)00141-1  PDF

88.       Nowak, M. A., Boerlijst, M. C., Cooke, J. & Maynard Smith, J. (1997). Evolution of genetic redundancy. Nature 388: 167-171. PMID: 9217155. DOI: 10.1038/40618  PDF

89.       Nowak, M. A., Bonhoeffer, S., Shaw, G. M. & May, R. M. (1997). Anti-viral drug treatment: Dynamics of resistance in free virus and infected cell populations. J. Theor. Biol. 184: 203-217. PMID: 9059598. DOI: 10.1006/jtbi.1996.0307  PDF

90.       Nowak, M. A., Lloyd, A. L., Vasquez, G. M., Wiltrout, T. A., Wahl, L. M., Bischofberger, N., Williams, J., Kinter, A., Fauci, A. S., Hirsch, V. M. & Lifson, J. D. (1997). Viral dynamics of primary viremia and antiretroviral therapy in simian immunodeficiency virus infection. J. Virol. 71: 7518-7525. PMID: 9311831. PMCID: PMC192098 PDF 

91.       Sigmund, K. & Nowak, M.A. (1997). The natural history of mutual aid: An eye for an eye, and a meal for a meal. In Wissenschaft als Kultur, ed. F. Stadler. New York: Springer, 259-272.

92.       Stekel. D., Parker, C. E. & Nowak, M.A. (1997). A model of lymphocyte recirculation. Immunol. Today 18: 216-221. PMID: 9153952. DOI: 10.1016/S0167-5699(97)01036-0   PDF

93.       Wein, L. M., Zenios, S. A. & Nowak, M.A. (1997). Dynamic multidrug therapies for HIV: A control theoretic approach. J. Theor. Biol. 185: 15-29. PMID: 9093552. DOI: 10.1006/jtbi.1996.0253 PDF

 

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1998

94.       Goh, W. C., Rogel, M. E., Kinsey, C. M., Michael, S. F., Fultz, P. N., Nowak, M. A. Hahn, B. H. & Emerman, M. (1998). HIV-1 Vpr increases viral expression by manipulation of the cell cycle: A mechanism for selection of Vpr in vivo. Nat. Med. 4: 65-71. PMID: 9427608. DOI: 10.1038/nm0198-065  PDF

95.       Kilby, J. M,. Hopkins, S., Venetta, T. M., DiMassimo, B., Cloud, G. A., Lee, J. Y., Alldredge, L., Hunter, E., Lambert, D., Bolognesi, D., Matthews, T., Johnson, M. R., Nowak, M. A., Shaw, G. M. & Saag, M. S. (1998). Potent suppression of HIV-1 replication in humans by T-20, a peptide inhibitor of gp41-mediated virus entry. Nat. Med. 4: 1302-1307. PMID: 9809555. DOI: 10.1038/3293  PDF

96.       Levin, B. R., Antia, R., Berliner, E., Bloland, P., Bonhoeffer, S., Cohen, M., DeRouin, T., Fields, P. I., Jafari, Jernigan, H. D., Lipsitch, M., McGowan, J. E., Mead, P., Nowak, M. A., Porco, T., Sykora, P., Simonsen, L., Spitznagel, J., Tauxe, R. & Tenover, F. (1998). Resistance to antimicrobial chemotherapy: A prescription for research and action. Am. J. Med. Sci. 315: 87-94. PMID: 9472907. DOI: 10.1097/00000441-199802000-00004  PDF

97.       Nowak, M. A., Krakauer, D. C., Klug, A. & May, R. M. (1998). Prion infection dynamics. Integr. Biol. 1: 3-15. DOI: 10.1002/(sici)1520-6602(1998)1:1%3C3::aid-inbi2%3E3.3.co;2-0  PDF

98.       Nowak, M. A. & Sigmund, K. (1998). Darwins Dynamik. DMV-Mitteilungen 4: 37-44.  PDF

99.      Nowak, M. A. & Sigmund, K. (1998). Evolution of indirect reciprocity by image scoring. Nature 393: 573-577. PMID: 9634232. DOI: 10.1038/31225  PDF

100.      Nowak, M. A. & Sigmund, K. (1998). The dynamics of indirect reciprocity. J. Theor. Biol. 194: 561-574. PMID: 9790830. DOI: 10.1006/jtbi.1998.0775  PDF

101.      Nowak, M. A. & Sigmund, K. (1998). What two legs can learn from four legs. Book review of Foundations of Social Evolution, S. A. Frank; Cooperation Among Animals, A. L. Dugatkin. Nature 395: 760-761. DOI: 10.1038/27368  PDF

102.      Ogg, G.S., Jin, X., Bonhoeffer, S., Dunbar, P. R., Nowak, M. A., S Monard, Segal, J. P., Cao, Y., Rowland-Jones, S. L., Cerundolo, V., Hurley, A., Markowitz, M., Ho, D. D., Nixon, D. F. & McMichael, A. J. (1998). Quantitation of HIV-1-specific cytotoxic T lymphocytes and plasma load of viral RNA. Science 279: 2103-2106. PMID: 9516110. DOI: 10.1126/science.279.5359.2103  PDF

103.      Ostrowski, M. A., Krakauer, D. C., Li, Y., Justement, S. J., Learn, G., Ehler, L. A., Stanley, S. K., Nowak, M. A. & Fauci, A. S. (1998). Effect of immune activation on the dynamics of human immunodeficiency virus replication and on the distribution of viral quasispecies. J. Virol. 72: 7772-7784. PMID: 9733813. PMCID: PMC110087 PDF

104.      Regoes, R. R., Wodarz, D. & Nowak, M. A. (1998). Virus dynamics: The effect of target cell limitation and immune responses on virus evolution. J. Theor. Biol. 191: 451-462. PMID: 9631576. DOI: 10.1006/jtbi.1997.0617  PDF

105.      Ribeiro, R. M., Bonhoeffer, S. & Nowak, M. A. (1998). The frequency of resistant mutant virus before anti-viral therapy. AIDS 12: 461-465. DOI: 10.1097/00002030-199805000-00006  PDF

106.      Sigmund, K., M Boerlijst & Nowak, M. A. (1998). Automata and inner states for repeated games. In Game Theory, Experience, Rationality, ed. W. Leinfeller, E. Köhler. London: Kluwer Academic Publishers, 131-139.  DOI: 10.1007/978-94-017-1654-3_11  PDF

107.      Sigmund, K. & Nowak, M. A. (1998). Cyber-sociology. Book review of The Complexity of Cooperation: Agent-Based Models of Competition and Collaboration, R Axelrod. Nature 392: 457. DOI: 10.1038/33069  PDF

108.      Wodarz, D., Klenerman, P., Nowak, M. A. (1998). Dynamics of cytotoxic T-lymphocyte exhaustion. Proc. Royal Soc. B. 265: 191-203. PMID: 9493406. PMCID: PMC1688878. DOI: 10.1098/rspb.1998.0282  PDF

109.      Wodarz, D. & Nowak, M. A. (1998). Mathematical models of virus dynamics and resistance. J. HIV Ther. 3: 36-41.  PDF

110.      Wodarz, D. & Nowak, M. A. (1998). The effect of different immune responses on the evolution of virulent CXCR4-tropic HIV. Proc. R. Soc. B. 265: 2149-2158. PMID: 9872003. PMCID: PMC1689517. DOI: 10.1098/rspb.1998.0552  PDF

 

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1999

111.      Arnaout, R. A., Lloyd, A. L., O’Brien, T. R., Goedert, J. J., Leonard, J. M. & Nowak, M. A. (1999). A simple relationship between viral load and survival time in HIV-1 infection. Proc. Natl. Acad. Sci. U.S.A. 96: 11549-11553. PMID: 10500214. PMCID: PMC18071. DOI: 10.1073/pnas.96.20.11549  PDF

112.      Bangham, C. R. M., Hall, S. E., Jeffery, K. J. M., Vine, A. M., Witkover, A. Nowak, M. A., Wodarz, D., Ususku, K. & Osame, M. (1999). Genetic control and dynamics of the cellular immune response to the human T-cell leukaemia virus, HTLV-I. Philos. Trans. Royal Soc. B. 354: 691-700. PMID: 10365395. PMCID: PMC1692558. DOI: 10.1098/rstb.1999.0422  PDF

113.      Callaway, D. S., Ribeiro, R. M. & Nowak, M. A. (1999). Virus phenotype switching and disease progression in HIV-1 infection. Proc. Royal Soc. B. 266: 2523-2530. PMID: 10693824. PMCID: PMC1690483. DOI: 10.1098/rspb.1999.0955  PDF

114.      Hockett, R. D, Kilby, J .M., Derdeyn, C. A., Saag, M. S., Sillers, M., Squires, K., Chiz, S., Nowak, M. A., Shaw, G. M. & Bucy, R. P. (1999). Constant mean viral copy number per infected cell in tissues regardless of high, low, or undetectable plasma HIV RNA. J. Exp. Med. 189: 1545-1554. PMID: 10330433. PMCID: PMC2193638. DOI: 10.1084/jem.189.10.1545  PDF

115.      Jefferey, K. J. M., Usuku, K., Hall, S. E., Matsumoto, W., Taylor, G. P., Proctor, J., Bunce, M., Ogg, G. S., Welsh, K. I., Weber, J. N., Lloyd, A. L., Nowak, M. A., Nagai, M., Kodama, D., Izumo, S., Osame, M. &. Bangham,  C. R. M. (1999). HLA alleles determine human T-lymphotropic virus -I (HTLV-I) proviral load and the risk of HTLV-1-associated myelopathy. Proc. Natl. Acad. Sci. U.S.A. 96: 3848-3853. PMID: 10097126. PMCID: PMC22383. DOI: 10.1073/pnas.96.7.3848  PDF

116.      Krakauer, D. C. & Nowak, M. A.(1999). Evolutionary preservation of redundant duplicated genes. Semin. Cell Dev. Biol. 10: 555-559. DOI: 10.1006/scdb.1999.0337 PDF

117.      Krakauer, D. C. & Nowak, M. A. (1999). T-cell induced pathogenesis in HIV: Bystander effects and latent infection. Proc. Royal Soc. B. 266: 1069-1075. PMID: 10380683. PMCID: PMC1689939. DOI: 10.1098/rspb.1999.0745  PDF

118.      Masel, J., Jansen, V. A. A. & Nowak, M. A. (1999). Quantifying the kinetic parameters of prion replication. Biophys. Chem. 77: 139-152. PMID: 10326247. DOI: 10.1016/S0301-4622(99)00016-2  PDF

119.      Nowak, M. A. (1999). The mathematical biology of human infections. Conserv. Ecol. 3 (2): 12. DOI: 10.5751/es-00138-030212

120.      Nowak, M. A. & Krakauer,  D. C. (1999). The evolution of language. Proc. Natl. Acad. Sci. U.S.A. 96: 8028-8033. PMID: 10393942. PMCID: PMC22182. DOI: 10.1073/pnas.96.14.8028  PDF

121.      Nowak, M. A., Krakauer, D. C. & Dress, A. (1999). An error limit for the evolution of language. Proc. R. Soc. B. 266: 2131-2136. PMID: 10902547. PMCID: PMC1690318. DOI: 10.1098/rspb.1999.0898  PDF

122.      Nowak, M. A., Plotkin, J. B. & Krakauer,  D. C. (1999). The evolutionary language game. J. Theor. Biol. 200: 147-162. PMID: 10504282. DOI: 10.1006/jtbi.1999.0981  PDF

123.      Nowak, M. A. & Sigmund, K. (1999). Aux racines de la coopération. Recherche 325: 38-39.  PDF

124.      Nowak, M. A. & Sigmund, K. (1999). Phage-lift for game theory. Nature 398: 367-368. PMID: 10201363. DOI: 10.1038/18761  PDF

125.      Ogg, G. S., Jin, X., Bonhoeffer, S., Moss, P., Nowak, M. A., Monard, S., Segal, J. P., Cao, Y., Rowland-Jones, S. L., Hurley, A., Markowitz, M., Ho, D. D., McMichael, A. J. & Nixon, D. F. (1999). Decay kinetics of human immunodeficiency virus-specific effector cytotoxic T lymphocytes after combination antiretroviral therapy. J. Virol. 73: 797-800. PMID: 9847391. PMCID: PMC103892 PDF

126.      Sigmund, K. & Nowak, M. A. (1999). Evolutionary game theory. Curr. Biol. 9: R503-R505. PMID: 10576907. DOI: 10.1016/S0960-9822(99)80321-2  PDF

127.      Taylor, G. P., Hall, S. E., Navarette, S., Michie, C. A., Davis, R., Witkover, A. D., Rossor, M., Nowak, M. A., Rudge, P., Matutes, E., Bangham, C. R. M. & Weber,  J. N. (1999). Effect of lamivudine on human T-cell leukemia virus type 1 (HTLV-1) DNA copy number, T-cell phenotype, and anti-Tax cytotoxic T-cell frequency in patients with HTLV-1 associated myelopathy. J. Virol. 73: 10289-10295. PMID: 10559346. PMCID: PMC113083.   PDF

128.      Wahl, L. M. & Nowak, M. A. (1999). The continuous Prisoner’s Dilemma: I. Linear reactive strategies. J. Theor. Biol. 200: 307-321. PMID: 10527720. DOI: 10.1006/jtbi.1999.0996  PDF

129.      Wahl, L. M. & Nowak, M. A. (1999). The continuous Prisoner’s Dilemma: II. Linear reactive strategies with noise. J. Theor. Biol. 200: 323-338. PMID: 10527721. DOI: 10.1006/jtbi.1999.0997  PDF

130.      Wodarz, D., Lloyd, A. L., Jansen, V. A. A. & Nowak, M. A. (1999). Dynamics of macrophage and T cell infection by HIV. J. Theor. Biol. 196: 101-113. PMID: 9892559. DOI: 10.1006/jtbi.1998.0816  PDF

131.      Wodarz, D. & Nowak, M. A. (1999). Dynamics of HIV pathogenesis and treatment. In Origin and Evolution of Viruses, eds. E. Domingo, R. Webster, J. Holland. London: Academic Press, 197-223. DOI: 10.1016/b978-012220360-2/50010-6  PDF

132.      Wodarz, D. & Nowak, M. A. (1999). Dynamics of immune escape in HIV infection. Wien Klin Wochenschr 111:  419-427.  PDF

133.      Wodarz, D. & Nowak, M. A. (1999). Evolutionary dynamics of HIV-1 induced subversion of the immune response. Immunol. Rev. 168: 75-89. PMID: 10399066. DOI: 10.1111/j.1600-065X.1999.tb01284.x  PDF

134.      Wodarz, D. & Nowak, M. A. (1999). Specific therapy regimes could lead to long-term immunological control of HIV. Proc. Natl. Acad. Sci. U.S.A. 96: 14464-14469. PMID: 10588728. PMCID: PMC24459. DOI: 10.1073/pnas.96.25.14464  PDF

135.      Wodarz, D., Nowak, M. A. & Bangham, C. R. M. (1999). The dynamics of HTLV-I and the CTL response. Immunol. Today 20: 220-227. PMID: 10322301. DOI: 10.1016/S0167-5699(99)01446-2  PDF

 

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2000

136.      Arnaout, R. A. & Nowak, M. A. (2000). Competitive coexistence in antiviral immunity. J. Theor. Biol. 204: 431-441. PMID: 10816366. DOI: 10.1006/jtbi.2000.2027  PDF

137.      Arnaout, R. A., Nowak, M. A. & Wodarz,  D. (2000). HIV-1 dynamics revisited: Biphasic decay by cytotoxic T-lymphocyte killing? Proc. Royal Soc. B. 267: 1347-1354. PMID: 10972131. PMCID: PMC1690670. DOI: 10.1098/rspb.2000.1149  PDF

138.      Barchet, W., Oehen, S., Klenerman, P., Wodarz, D., Bocharov, G., Lloyd, A. L., Nowak, M. A., Hengartner, H., Zinkernagel, R. M. & Ehl,  S. (2000). Direct quantitation of rapid elimination of viral antigen-positive lymphocytes by antiviral CD8+ T cells in vivo. Eur. J. Immunol. 30: 1356-1363. PMID: 10820382. DOI: 10.1002/(SICI)1521-4141(200005)30:5%3C1356::AID-IMMU1356%3E3.0.CO;2-K  PDF

139.      Krakauer, D. C. & Nowak, M. A. (2000). Book review of Fragile Dominion: Complexity and the Commons, S. Levin. Notices Am. Math. Soc. 147: 564-568.  PDF

140.      Lifson, J. D., Rossio, J. L., Arnaout, R., Li, L., Parks, T. L., Schneider, D. K., Kiser, R. F., Coalter, V. J., Walsh, G., Imming, R. J., Fisher, B., Flynn, B. M., Bischofberger, N., Piatak, M., Hirsch, V. M., Nowak, M. A. & Wodarz, D. (2000). Containment of simian immunodeficiency virus infection: Cellular immune responses and protection from rechallenge following transient postinoculation antiretroviral treatment. J. Virol. 74: 2584-2593. PMID: 10684272. PMCID: PMC111746. DOI: 10.1128/JVI.74.6.2584-2593.2000 PDF

141.      Nowak, M. A. (2000). Evolutionary biology of language. Philos. Trans. Royal Soc. B. 355: 1615-1622. PMID: 11127907. PMCID: PMC1692897. DOI: 10.1098/rstb.2000.0723  PDF

142.      Nowak, M. A. (2000). Homo grammaticus. Nat. Hist. 109: 36-44.  PDF

143.      Nowak, M. A. (2000). The basic reproductive ratio of a word, the maximum size of a lexicon. J. Theor. Biol. 204: 179-189. PMID: 10887900. DOI: 10.1006/jtbi.2000.1085  PDF

144.      Nowak, M. A. & May, R. M. (2000). Virus Dynamics: Mathematical Principles of Immunology and Virology. Oxford: Oxford University Press. ISBN: 9780198504177

145.      Nowak, M. A., Page, K. M. & Sigmund, K. (2000). Fairness versus reason in the ultimatum game. Science 289: 1773-1775. PMID: 10976075. DOI: 10.1126/science.289.5485.1773  PDF

146.      Nowak, M. A., Plotkin, J. B. & Jansen, V. A. A. (2000). The evolution of syntactic communication. Nature 404: 495-498. DOI: 10.1038/35006635  PDF

147.      Nowak, M. A. & Sigmund, K. (2000). Cooperation versus competition. Financ. Anal. J. 56: 13-22. DOI: 10.2469/faj.v56.n4.2370  PDF

148.      Nowak, M. A. & Sigmund, K. (2000). Games on grids. In The Geometry of Ecological Interactions, eds. U. Dieckmann, R. Law, J. A. J Metz. Cambridge: Cambridge University Press, 135-150.  PDF

149.      Nowak, M. A. & Sigmund, K. (2000). Shrewd investments. Science 288: 819-820. PMID: 10809651. DOI: 10.1126/science.288.5467.819  PDF

150.      Page, K. M. & Nowak, M. A. (2000). A generalized adaptive dynamics framework can describe the evolutionary ultimatum game. J. Theor. Biol. 209: 173-179. PMID: 11401459. DOI: 10.1006/jtbi.2000.2251  PDF

151.      Page, K. M., Nowak, M. A. & Sigmund, K. (2000). The spatial ultimatum game. Proc. R. Soc. B. 267: 2177-2182. PMID: 11413630. PMCID: PMC1690799. DOI: 10.1098/rspb.2000.1266  PDF

152.      Plotkin, J. B. & Nowak, M. A. (2000). Language evolution and information theory. J. Theor. Biol. 205:147-159. PMID: 10860707. DOI: 10.1006/jtbi.2000.2053  PDF

153.      Plotkin, J. B., Potts, M. D., Yu, D. W., Bunyavejchewin, S., Condit, R., Foster, R., Hubbell, S., LaFrankie, J., Manokaran, N., Seng, L. H., Sukumar, R., Nowak, M. A. & Ashton, P. S. (2000). Predicting species diversity in tropical forests. Proc. Natl. Acad. Sci. U.S.A. 97: 10850-10854. PMID: 11005859. PMCID: PMC27112. DOI: 10.1073/pnas.97.20.10850  PDF

154.      Regoes, R.R., Nowak, M. A. & Bonhoeffer, S. (2000). Evolution of virulence in a heterogeneous host population. Evolution 54: 64-71. DOI: 10.1554/0014-3820(2000)054[0064:EOVIAH]2.0.CO;2  PDF

155.      Sigmund, K. & Nowak, M. A. (2000). A tale of two selves. Science 290: 949-950. DOI: 10.1126/science.290.5493.949  PDF

156.      Sigmund, K. & Nowak, M. A. (2000). Playing for keeps. Book review of Game Theory Evolving: A Problem-Centered Introduction to Modeling Strategic Interaction, H Gintis. Science 290: 281. DOI: 10.1126/science.290.5490.281  PDF

157.      Trapa, P. E. & Nowak, M. A. (2000). Nash equilibria for an evolutionary language game. J. Math. Biol. 41: 172-188. DOI: 10.1007/s002850070004  PDF

158.      Wahl, L. M., Bittner, B. & Nowak, M. A. (2000). Immunological transitions in response to antigenic mutation during viral infection. Int. Immunol. 12: 1371-1380. DOI: 10.1093/intimm/12.10.1371  PDF

159.      Wahl, L. M. & Nowak, M. A. (2000). Adherence and drug resistance: Predictions for therapy outcome. Proc. Royal Soc. B. 267: 835-843. PMID: 10819155. PMCID: PMC1690604. DOI: 10.1098/rspb.2000.1079  PDF

160.      Wodarz, D., Arnaout, R. A., Nowak, M. A. & Lifson, J. D. (2000). Transient antiretroviral treatment during acute simian immunodeficiency virus infection facilitates long-term control of the virus. Phil. Trans. R. Soc.B. 355: 1021-1029. PMID: 11186303. PMCID: PMC1692816. DOI: 10.1098/rstb.2000.0639  PDF

161.      Wodarz, D., May, R. M. & Nowak, M. A. (2000). The role of antigen-independent persistence of memory cytotoxic T lymphocytes. Int. Immunol. 12: 467-477. DOI: 10.1093/intimm/12.4.467  PDF

162.      Wodarz, D. & Nowak, M. A. (2000). CD8 memory, immunodominance, and antigenic escape. Eur. J. Immunol. 30: 2704-2712. DOI: 10.1002/1521-4141(200009)30:9%3C2704::AID-IMMU2704%3E3.0.CO;2-0  PDF

163.      Wodarz, D. & Nowak, M. A. (2000). Correlates of cytotoxic T-lymphocyte-mediated virus control: Implications for immuno-suppressive infections and their treatment. Philos. Trans. Royal Soc. B. 355: 1059-1070. PMID: 11186307. PMCID: PMC1692817. DOI: 10.1098/rstb.2000.0643  PDF

164.      Wodarz, D. & Nowak, M. A. (2000). HIV therapy: Managing resistance. Proc. Natl. Acad. Sci. U.S.A. 97: 8193-8195. PMID: 10899988. PMCID: PMC34002. DOI: 10.1073/pnas.97.15.8193  PDF

165.      Wodarz, D. & Nowak, M. A. (2000). Immune responses and viral phenotype: Do replication rate and cytopathogenicity influence virus load? J. Theor. Med. 2: 113-127. DOI: 10.1080/10273660008833041  PDF

166.      Wodarz, D., Page, K. M., Arnaout, R. A., Thomsen, A. R., Lifson, J. D. & Nowak, M. A. (2000). A new theory of cytotoxic T-lymphocyte memory: Implications for HIV treatment. Philos. Trans. Royal Soc. B. 355: 329-343. PMID: 10794051. PMCID: PMC1692738. DOI: 10.1098/rstb.2000.0570  PDF

 

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2001

167.      Komarova, N. L., Niyogi, P. & Nowak, M. A. (2001). The evolutionary dynamics of grammar acquisition. J. Theor. Biol. 209: 43-59. PMID: 11237569. DOI: 10.1006/jtbi.2000.2240  PDF

168.      Komarova, N. L. & Nowak, M. A. (2001). Natural selection of the critical period for language acquisition. Proc. Royal Soc. B. 268: 1189-1196. PMID: 11375108. PMCID: PMC1088726. DOI: 10.1098/rspb.2001.1629  PDF

169.      Komarova, N. L. & Nowak, M. A. (2001). The evolutionary dynamics of the lexical matrix. Bull. Math. Biol. 63: 451-484. PMID: 11374301. DOI: 10.1006/bulm.2000.0222  PDF

170.      Krakauer, D. C. & Nowak, M. A. (2001). Genetic redundancy. In Encyclopedia of Genetics, eds. S. Brenner, J. Miller. London: Academic Press, 845-846. DOI: 10.1006/rwgn.2001.0519  PDF

171.      Lifson, J. D., Rossio, J. L., Piatak, M., Parks, T., Li, L., Kiser, R., Coalter, V., Fisher, B., Flynn, B. M., Hirsch, V. M., Means, R. E., Czajak, S., Reimann, K. A., Schmitz, J. E., Ghrayeb, J., Bischofberger, N., Nowak, M. A., Desrosiers, R. C. & Wodarz, D. (2001). Role of CD8+ lymphocytes in control of simian immunodeficiency virus infection and resistance to rechallenge after transient early antiretroviral treatment. J. Virol. 75: 10187-10199. PMID: 11581387. PMCID: PMC114593. DOI: 10.1128/JVI.75.21.10187-10199.2001 PDF

172.      Nowak, M. A. & Komarova, N. L.(2001). Towards an evolutionary theory of language. Trends Cogn. Sci. 5: 288-295. PMID: 11425617. DOI: 10.1016/S1364-6613(00)01683-1  PDF

173.      Nowak, M. A. Komarova, N. L. & Niyogi,  P. (2001). Evolution of universal grammar. Science 291: 114-118. PMID: 11141560. DOI: 10.1126/science.291.5501.114  PDF

174.      Plotkin, J. B. & Nowak, M. A. (2001). Major transitions in language evolution. Entropy 3: 227-246. DOI: 10.3390/e3040227 PDF

175.      Sigmund, K., Hauert, C. & Nowak, M. A. (2001). Reward and punishment. Proc. Natl. Acad. Sci. U.S.A. 98: 10757-10762. PMID: 11553811. PMCID: PMC58548. DOI: 10.1073/pnas.161155698  PDF

176.      Sigmund, K. & Nowak, M. A. (2001). Evolution: Tides of tolerance. Nature 414: 403-405. PMID: 11719787. DOI: 10.1038/35106672  PDF

177.      Wodarz, D., Hall, S. E., Usuku, K., Osame, M., Ogg, G. S., McMichael, A. J., Nowak, M. A. & Bangham, C. R. M. (2001). Cytotoxic T-cell abundance and virus load in human immunodeficiency virus type 1 and human T-cell leukemia virus type 1. Proc. Royal Soc. B. 268: 1215-1221. PMID: 11410146. PMCID: PMC1088729. DOI: 10.1098/rspb.2001.1608  PDF

 

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2002

178.      Belz, G. T., Wodarz, D., Diaz, G., Nowak, M. A. & Doherty, P. C. (2002). Compromised influenza virus-specific CD8+-T-cell memory in CD4+-T-cell-deficient mice. J. Virol. 76: 12388-12393. PMID: 12414983. PMCID: PMC136883. DOI: 10.1128/JVI.76.23.12388-12393.2002  PDF

179.      Komarova, N. L., Lengauer, C., Vogelstein, B. & Nowak, M. A. (2002). Dynamics of genetic instability in sporadic and familial colorectal cancer. Cancer Biol. Ther. 1: 685-692. PMID: 12642695. DOI: 10.4161/cbt.321  PDF

180.      Komarova, N. L. & Nowak, M. A. (2002). Population dynamics of grammar acquisition. In Simulating the Evolution of Language, eds. A. Cangelosi, D. Parisi. London: Springer Verlag, 149-163. DOI: 10.1007/978-1-4471-0663-0_7   PDF

181.      Michor, F. & Nowak, M. A. (2002). Evolution: The good, the bad and the lonely. Nature 419: 677-679. PMID: 12384681. DOI: 10.1038/419677a  PDF

182.      Michor, F. & Nowak, M. A. (2003). Immunology tomorrow. Book review of Immunology and Evolution of Infectious Disease, S. A. Frank. Nature 420: 741-742. DOI: 10.1038/420741b  PDF

183.      Nowak, M. A. (2002). From quasispecies to universal grammar. Z. Phys. Chem. 16: 5-20. DOI: 10.1524/zpch.2002.216.1.005  PDF

184.      Nowak, M. A., Komarova, N. L. & Niyogi, P. (2002). Computational and evolutionary aspects of language. Nature 417: 611-610. PMID: 12050656. DOI: 10.1038/nature00771  PDF

185.      Nowak, M. A., Komarova, N. L., Sengupta, A., Jallepalli, P. F., Shih, I. M., Vogelstein, B., Lengauer, C. (2002). The role of chromosomal instability in tumor initiation. Proc. Natl. Acad. Sci. U.S.A. 99: 16226-16231. PMID: 12446840. PMCID: PMC138593. DOI: 10.1073/pnas.202617399  PDF

186.      Nowak, M. A. & Sigmund, K. (2002). Bacterial game dynamics. Nature 418: 138-139. PMID: 12110873. DOI: 10.1038/418138a  PDF

187.      Nowak, M. A. & Sigmund, K. (2002) Super- and coinfection: The two extremes. In Adaptive Dynamics of Infectious Diseases: In Pursuit of Virulence Management, eds. U. Dieckmann, J. A. J. Metz, M. Sabelis & K. Sigmund. Cambridge: Cambridge University Press, 124-138. DOI: 10.1017/cbo9780511525728.013   PDF 

188.      Page, K. M. & Nowak, M. A. (2002). Empathy leads to fairness. Bull. Math. Biol. 64: 1101-1116. PMID: 12508533. DOI: 10.1006/bulm.2002.0321  PDF

189.      Page, K. M. & Nowak, M. A. (2002). Unifying evolutionary dynamics. J. Theor. Biol. 219: 93-98. PMID: 12392978. DOI: 10.1006/jtbi.2002.3112  PDF

190.      Plotkin, J. B. & Nowak, M. A. (2002). The different effects of apoptosis and DNA repair on tumorigenesis. J. Theor. Biol. 214: 453-467. PMID: 11846602. DOI: 10.1006/jtbi.2001.2471  PDF

191.      Sigmund, K., Fehr, E. & Nowak, M. A. (2002). The economics of fair play. Sci. Am. 286: 82-87. PMID: 11799620. DOI: 10.1038/scientificamerican0102-82  PDF

192.      Wodarz, D. & Nowak, M. A. (2002). Mathematical models of HIV pathogenesis and treatment. Bioessays 24: 1178-1187. PMID: 12447982. DOI: 10.1002/bies.10196  PDF

 

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2003

193.      Frank, S. A., Iwasa, Y. & Nowak, M. A. (2003). Patterns of cell division and the risk of cancer. Genetics 163: 1527-1532. PMID: 12702695. PMCID: PMC1462514 PDF

194.      Frank, S.A. & Nowak, M. A. (2003). Cell biology: Developmental predisposition to cancer. Nature 422:494. PMID: 12673242. DOI: 10.1038/422494a  PDF

195.      Iwasa, Y., Michor, F. & Nowak, M. A. (2003). Evolutionary dynamics of escape from biomedical intervention. Proc. Royal Soc. B. 270: 2573-2578. PMID: 14728779. PMCID: PMC1691545. DOI: 10.1098/rspb.2003.2539  PDF

196.      Komarova, N. L. & Nowak, M. A. (2003). Language dynamics in finite populations. J. Theor. Biol. 221: 445-457. PMID: 12642119. DOI: 10.1006/jtbi.2003.3199  PDF

197.      Komarova, N. L. & Nowak, M. A. (2003). Language, learning and evolution. In Language Evolution, eds. MH Christiansen, S Kirby. Oxford University Press, 317-337. DOI: 10.1093/acprof:oso/9780199244843.003.0017  PDF

198.      Komarova, N. L., Sengupta, A. & Nowak, M. A. (2003). Mutation-selection networks of cancer initiation: Tumor suppressor genes and chromosomal instability. J. Theor. Biol. 223: 433-450. PMID: 12875822. DOI: 10.1016/S0022-5193(03)00120-6   PDF 

199.      Michor, F., Frank, S. A., May, R. M., Iwasa, Y. & Nowak, M. A. (2003). Somatic selection for and against cancer. J. Theor. Biol. 225: 377-382. PMID: 14604590. DOI: 10.1016/S0022-5193(03)00267-4  PDF

200.      Michor, F., Iwasa, Y., Komarova, N. L. & Nowak, M. A. (2003). Local regulation of homeostasis favors chromosomal instability. Curr. Biol. 13: 581-584. PMID: 12676089. DOI: 10.1016/S0960-9822(03)00172-6  PDF

201.      Michor, F., Nowak, M. A., Frank, S. A. & Iwasa, Y. (2003). Stochastic elimination of cancer cells. Proc. Royal Soc. B. 270: 2017-2024. PMID: 14561289. PMCID: PMC1691466. DOI: 10.1098/rspb.2003.2483  PDF

202.      Mitchener, G. & Nowak, M. A. (2003). Competitive exclusion and coexistence of universal grammars. Bull. Math. Biol. 65: 67-93. PMID: 12597117. DOI: 10.1006/bulm.2002.0322  PDF

203.      Nowak, M. A., Michor, F., & Iwasa, Y. (2003). The linear process of somatic evolution. Proc. Natl. Acad. Sci. U.S.A. 100: 14966-14969. PMID: 14657359. PMCID: PMC299861. DOI: 10.1073/pnas.2535419100  PDF

204.      Rajagopalan, H., Nowak, M. A., Vogelstein, B. & Lengauer, C.(2003). The significance of unstable chromosomes in colorectal cancer. Nat. Rev. Cancer 3: 695-701. PMID: 12951588. DOI: 10.1038/nrc1165  PDF

205.      Sasaki, A. & Nowak, M. A.(2003). Mutation landscapes. J. Theor. Biol. 224: 241-247. PMID: 12927530. DOI: 10.1016/S0022-5193(03)00161-9  PDF

206.      Wei, X., Decker, J. M., Wang, S., Hui, H., Kappes, J. C., Wu, X., Salazar-Gonzalez, J. F., Salazar, M. G., Kilby, J. M., Saag, M. S., Komarova, N. L., Nowak, M. A., Hahn, B. H., Kwong, P. D. & Shaw, G. M. (2003). Antibody neutralization and escape by HIV-1. Nature 422: 307-312. PMID: 12646921. DOI: 10.1038/nature01470  PDF & SI

 

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2004

207.      Frank, S. & Nowak, M. A. (2004). Problems of somatic mutation and cancer. Bioessays 26: 291-299. PMID: 14988930. DOI: 10.1002/bies.20000  PDF

208.      Iwasa, Y., Michor, F. & Nowak, M. A. (2004). Evolutionary dynamics of invasion and escape. J. Theor. Biol. 226: 205-214. PMID: 14643190. DOI: 10.1016/j.jtbi.2003.08.014  PDF

209.      Iwasa, Y., Michor, F. & Nowak, M. A. (2004). Some basic properties of immune selection. J. Theor. Biol. 229:179-188. PMID: 15207473. DOI: 10.1016/j.jtbi.2004.03.013  PDF

210.      Iwasa, Y., Michor, F. & Nowak, M. A. (2004). Stochastic tunnels in evolutionary dynamics. Genetics 166: 1571-1579. PMID: 15082570. PMCID: PMC1470783. DOI: 10.1534/genetics.166.3.1571  PDF

211.      Jones, N. A., Wei, X., Flower, D. R., Wong, M. L., Michor, F., Saag, M. S., Hahn, B. H., Nowak, M. A. & Shaw, G. M. (2004). Determinants of human immunodeficiency virus type 1 escape from the primary CD8+ cytotoxic T lymphocyte response. J. Exp. Med. 200:1243-1256. PMID: 15545352. PMCID: PMC2211924. DOI: 10.1084/jem.20040511  PDF

212.      Matsen, F. A. & Nowak, M. A. (2004). Win-stay, lose-shift in language learning from peers. Proc. Natl. Acad. Sci. U.S.A.101: 18053-18057. PMID: 15604145. PMCID: PMC539782. DOI: 10.1073/pnas.0406608102 PDF

213.      Michor, F., Iwasa, Y. & Nowak, M. A. (2004). Dynamics of cancer progression. Nat. Rev. Cancer 4: 197-205. PMID: 14993901. DOI: 10.1038/nrc1295  PDF

214.      Michor, F., Iwasa, Y., Rajagopalan, H., Lengauer, C. & Nowak, M. A. (2004). Linear model of colon cancer initiation. Cell Cycle 3: 358-362. PMID: 14726709. DOI: 10.4161/cc.3.3.690  PDF

215.      Mitchener, W. G. & Nowak, M. A. (2004). Chaos and language. Proc. Royal Soc. B. 271: 701-704. PMID: 15209103. PMCID: PMC1691646. DOI: 10.1098/rspb.2003.2643  PDF

216.      Nowak, M. A. (2004). Prisoners of the dilemma. Nature 427: 491. DOI: 10.1038/427491a  PDF

217.      Nowak, M. A. (2004). Theory is available light. Curr. Biol. 14: R406-R407. PMID: 15182682. DOI: 10.1016/j.cub.2004.05.027  PDF

218.      Nowak, M. A., Michor, F., Komarova, N. L. & Iwasa, Y. (2004). Evolutionary dynamics of tumor suppressor gene inactivation. Proc. Natl. Acad. Sci. U.S.A. 101: 10635-10638. PMID: 15252197. PMCID: PMC489986. DOI: 10.1073/pnas.0400747101  PDF

219.      Nowak, M. A., Sasaki, A., Taylor, C. & Fudenberg, D.(2004). Emergence of cooperation and evolutionary stability in finite populations. Nature 428: 646-650. PMID: 15071593. DOI: 10.1038/nature02414  PDF

220.      Nowak, M. A. & Sigmund, K.(2004). Evolutionary dynamics of biological games. Science 303: 793-799. DOI: 10.1126/science.1093411  PDF

221.      Nowak, M. A. &Sigmund, K. (2004). Population dynamics in evolutionary ecology. In Life Sciences for the 21st Century, eds. E. Keinan, I. Schechter, M. Sela. Weinham: Wiley-VCH, 327-343.  PDF

222.      Taylor, C., Fudenberg, D., Sasaki, A. & Nowak, M. A. (2004). Evolutionary game dynamics in finite populations. Bull. Math. Biol. 66: 1621-1644. DOI: 10.1016/j.bulm.2004.03.004  PDF

 

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2005

223.      Imhof, L. A., Fudenberg, D. & Nowak, M. A. (2005). Evolutionary cycles of cooperation and defection. Proc. Natl. Acad. Sci. U.S.A. 102: 10797-10800. PMID: 16043717. PMCID: PMC1182423. DOI: 10.1073/pnas.0502589102  PDF

224.      Iwasa, Y., Michor, F., Komarova, N. L. & Nowak, M. A. (2005). Population genetics of tumor suppressor genes. J. Theor. Biol. 233: 15-23. PMID: 15615616. DOI: 10.1016/j.jtbi.2004.09.001 PDF

225.      Iwasa, Y., Michor, F. & Nowak, M. A. (2005). Virus evolution within patients increases pathogenicity. J. Theor. Biol. 232: 17-26. PMID: 15498589. DOI: 10.1016/j.jtbi.2004.07.016  PDF

226.      Lieberman, E., Hauert, C. & Nowak, M. A. (2005). Evolutionary dynamics on graphs. Nature 433: 312-316. PMID: 15662424. DOI: 10.1038/nature03204  PDF & SI

227.      Michor, F., Hughes, T. P., Iwasa, Y., Branford, S., Shah, N. P., Sawyers, C. L. & Nowak, M. A. (2005). Dynamics of chronic myeloid leukemia. Nature 435: 1267-1270. PMID: 15988530. DOI: 10.1038/nature03669  PDF & SI

228.      Michor, F., Iwasa, Y., Lengauer, C. & Nowak, M. A. (2005). Dynamics of colorectal cancer. Semin. Cancer Biol. 15: 484-493. DOI: 10.1016/j.semcancer.2005.06.005  PDF

229.      Michor, F., Iwasa, Y., Vogelstein, B., Lengauer, C. & Nowak, M. A. (2005). Can chromosomal instability initiate tumorigenesis? Semin. Cancer Biol. 15: 43-45. DOI: 10.1016/j.semcancer.2004.09.007  PDF

230.      Nowak, M. A. & Komarova, N.L. (2005). The evolution of altruism: From game theory to human language. In Spiritual Information, ed. Harper, C. Templeton Foundation Press, 308-314.  PDF

231.      Nowak, M. A. & Sigmund, K. (2005). Evolution of indirect reciprocity. Nature 437: 1291-1298. PMID: 16251955.  DOI: 10.1038/nature04131  PDF

232.      Traulsen, A., Sengupta, A. & Nowak, M. A. (2005). Stochastic evolutionary dynamics on two levels. J. Theor. Biol. 235: 393-401. PMID: 15882701. DOI: 10.1016/j.jtbi.2005.01.019  PDF

233.      Willensdorfer, M. & Nowak, M. A. (2005). Mutation in evolutionary games can increase average fitness at equilibrium. J. Theor. Biol. 237: 355-362. PMID: 15979651. DOI: 10.1016/j.jtbi.2005.04.020  PDF

 

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2006

234.      Bürger, R., Willensdorfer, M. & Nowak, M. A. (2006). Why are phenotypic mutation rates much higher than genotypic mutation rates? Genetics 172: 197-206. DOI: 10.1534/genetics.105.046599  PDF

235.      Dingli, D. & Nowak, M. A. (2006). Cancer biology: Infectious tumour cells. Nature 443: 35-36. PMID: 16957717. PMCID: PMC2711443. DOI: 10.1038/443035a  PDF

236.      Fudenberg, D., Nowak, M. A., Taylor, C. & Imhof, L. (2006). Evolutionary game dynamics in finite populations with strong selection and weak mutation. Theor. Popul. Biol. 70: 352-363. DOI: 10.1016/j.tpb.2006.07.006  PDF

237.      Hauert, C., Michor, F., Nowak, M. A. & Doebeli, M. (2006). Synergy and discounting of cooperation in social dilemmas. J. Theor. Biol. 239: 195-202. PMID: 16242728. PMCID: PMC2891160. DOI: 10.1016/j.jtbi.2005.08.040  PDF

238.      Imhof, L. A. & Nowak, M. A. (2006). Evolutionary game dynamics in a Wright-Fisher process. J. Math. Biol. 52: 667-681. PMID: 16463183. PMCID: PMC3279756. DOI: 10.1007/s00285-005-0369-8  PDF

239.      Iwasa, Y., Michor, F., Nowak, M. A. (2006). Evolution of resistance during clonal expansion. Genetics 172: 2557-2566. PMID: 16636113. PMCID: PMC1456382. DOI: 10.1534/genetics.105.049791  PDF

240.      Michor, F., Iwasa, Y. & Nowak, M. A. (2006). The age incidence of chronic myeloid leukemia can be explained by a one-mutation model. Proc. Natl. Acad. Sci. U.S.A. 103: 14931-14934. PMID: 17001000. PMCID: PMC1595453. DOI: 10.1073/pnas.0607006103  PDF

241.      Michor, F., Nowak, M. A. & Iwasa, Y. (2006). Evolution of resistance to cancer therapy. Curr. Pharm. Design 12: 261-271. DOI: 10.2174/138161206775201956  PDF

242.      Michor, F., Nowak, M. A. & Iwasa, Y. (2006). Stochastic dynamics of metastasis formation. J. Theor. Biol. 240:   521-530. PMID: 16343545. DOI: 10.1016/j.jtbi.2005.10.021  PDF

243.      Nowak, M. A. (2006). Evolutionary Dynamics: Exploring the Equations of Life. Cambridge, MA: Harvard University Press. ISBN: 9780674023383

244.      Nowak, M. A. (2006). Five rules for the evolution of cooperation. Science 314: 1560-1563. PMID: 17158317. PMCID: PMC3279745. DOI: 10.1126/science.1133755  PDF

245.      Nowak, M. A., Michor, F. & Iwasa, Y. (2006). Genetic instability and clonal expansion. J. Theor. Biol. 241: 26-32. PMID: 16405914. PMCID: PMC3286117. DOI: 10.1016/j.jtbi.2005.11.012  PDF

246.      Ohtsuki, H., Hauert, C., Lieberman, E. & Nowak, M. A. (2006). A simple rule for the evolution of cooperation on graphs. Nature 441: 502-505. PMID: 16724065. PMCID: PMC2430087. DOI: 10.1038/nature04605   PDF & SI

247.      Ohtsuki, H. & Nowak, M. A. (2006). Evolutionary games on cycles. Proc. Royal Soc. B. 273: 2249-2256. PMID: 16901846. PMCID: PMC1635521.  DOI: 10.1098/rspb.2006.3576  PDF

248.      Ohtsuki, H. & Nowak, M. A. (2006). The replicator equation on graphs. J. Theor. Biol. 243: 86-97. Evolutionary games on cycles. PMID: 16860343. PMCID: PMC2430083. DOI: 10.1016/j.jtbi.2006.06.004  PDF

249.      Pacheco, J. M., Traulsen, A. & Nowak, M. A. (2006). Active linking in evolutionary games. J. Theor. Biol. 243: 437-443. PMID: 16901509. PMCID: PMC3279753. DOI: 10.1016/j.jtbi.2006.06.027  PDF

250.      Pacheco, J. M., Traulsen, A. & Nowak, M. A. (2006). Coevolution of strategy and structure in complex networks with dynamical linking. Phys. Rev. Lett. 97: 258103. PMID: 17280398. PMCID: PMC2430061. DOI: 10.1103/PhysRevLett.97.258103  PDF

251.      Pfeiffer, T. & Nowak, M. A. (2006). Climate change: All in the game. Nature 441: 583-584. PMID: 16738648.  DOI: 10.1038/441583a  PDF

252.      Pfeiffer, T. & Nowak, M. A. (2006). Digital cows grazing on digital grounds. Curr. Biol. 16: R946-R949. PMID: 17113371. PMCID: PMC2678723. DOI: 10.1016/j.cub.2006.10.011  PDF

253.      Taylor, C., Iwasa, Y. & Nowak, M. A. (2006). A symmetry of fixation times in evolutionary dynamics. J. Theor. Biol. 243: 245-251. PMID: 16890959. PMCID: PMC2879639. DOI: 10.1016/j.jtbi.2006.06.016  PDF

254.      Taylor, C. & Nowak, M. A. (2006). Evolutionary game dynamics with non-uniform interaction rates. Theor. Popul. Biol. 69: 243-252. PMID: 16427669. PMCID: PMC2880897. DOI: 10.1016/j.tpb.2005.06.009  PDF

255.      Traulsen, A. & Nowak, M. A. (2006). Evolution of cooperation by multilevel selection. Proc. Natl. Acad. Sci. U.S.A. 103: 10952-10955. PMID: 16829575. PMCID: PMC1544155. DOI: 10.1073/pnas.0602530103  PDF

256.      Traulsen, A., Nowak, M. A. & Pacheco, J. M. (2006). Stochastic dynamics of invasion and fixation. Phys. Rev. E. 74: 011909. PMID: 16907129. PMCID: PMC2904085. DOI: 10.1103/PhysRevE.74.011909 PDF

 

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2007

257.      Beerenwinkel, N., Antal, T., Dingli, D., Traulsen, A., Kinzler, K. W., Velculescu, V. E., Vogelstein, B. & Nowak, M. A. (2007). Genetic progression and the waiting time to cancer. PLoS Comput. Biol. 3: e225. PMID: 17997597. PMCID: PMC2065895. DOI: 10.1371/journal.pcbi.0030225  PDF

258.      Hauert, C., Traulsen, A., Brandt, H., Nowak, M. A. & Sigmund, K. (2007). Via freedom to coercion: The emergence of costly punishment. Science 316: 1905-1907. PMID: 17600218. PMCID: PMC2430058. DOI:  10.1126/science.1141588  PDF

259.      Imhof, L. A., Fudenberg, D. & Nowak, M. A. (2007). Tit-for-tat or win-stay, lose-shift? J. Theor. Biol. 247: 574-580. PMID: 17481667. PMCID: PMC2460568. DOI: 10.1016/j.jtbi.2007.03.027  PDF

260.      Iwasa, Y., Michor, F. & Nowak, M. A. (2007). Directional evolution of virus within a host under immune selection. In Mathematics for Life Science and Medicine, Vol. 2, eds. Y. Takeuchi, K. Sato, Y. Iwasa. Springer: New York, 155-176. DOI:  10.1007/978-3-540-34426-1_7 PDF

261.      Lieberman, E., Michel, J. B., Jackson, J., Tang, T. & Nowak, M. A. (2007). Quantifying the evolutionary dynamics of language. Nature 449: 713-716. PMID: 17928859. PMCID: PMC2460562. DOI: 10.1038/nature06137  PDF & SI

262.      Nowak, M. A. & Roch,  S. (2007). Upstream reciprocity and the evolution of gratitude. Proc. Royal Soc. B. 274: 605-609. PMID: 17254983. PMCID: PMC2197219. DOI: 10.1098/rspb.2006.0125  PDF

263.      Nowak, M. A. &Sigmund,  K. (2007). How populations cohere: Five rules for cooperation. In Theoretical Ecology: Principles and Applications, eds. R. M. May, A. McLean. Oxford: Oxford University Press, 7-16.  PDF

264.      Ohtsuki, H., Bordalo, P. & Nowak, M. A. (2007). The one third law of evolutionary dynamics. J. Theor. Biol. 249: 289-295. PMID: 17826798. PMCID: PMC2430062. DOI: 10.1016/j.jtbi.2007.07.005 PDF

265.      Ohtsuki, H. & Nowak, M. A. (2007). Direct reciprocity on graphs. J. Theor. Biol. 247: 462-470. PMID: 17466339. PMCID: PMC2376797. DOI: 10.1016/j.jtbi.2007.03.018  PDF

266.      Ohtsuki, H., Nowak, M. A. & Pacheco, J. M. (2007). Breaking the symmetry between interaction and replacement in evolutionary dynamics on graphs. Phys. Rev. Lett. 98: 108106. PMID: 17358573. PMCID: PMC2387227. DOI: 10.1103/PhysRevLett.98.108106  PDF

267.      Ohtsuki, H., Pacheco, J. M. & Nowak, M. A. (2007). Evolutionary graph theory: Breaking the symmetry between interaction and replacement. J. Theor. Biol. 246: 681-694. PMID: 17350049. PMCID: PMC2396517. DOI:  10.1016/j.jtbi.2007.01.024  PDF

268.      Taylor, C. & Nowak, M. A. (2007).  Transforming the dilemma. Evolution 61: 2281-2292. PMCID: PMC2384164. PMCID: PMC2396516. DOI: 10.1111/j.1558-5646.2007.00196.x  PDF

269.      Traulsen, A., Iwasa, Y. & Nowak, M. A. (2007). The fastest evolutionary trajectory. J. Theor. Biol. 249: 617-623. PMID: 17900629. PMCID: PMC2384164. DOI: 10.1016/j.jtbi.2007.08.012  PDF

270.      Traulsen, A. & Nowak, M. A. (2007). Chromodynamics of cooperation in finite populations. PLoS ONE 2: e270. PMID: 17342204. PMCID: PMC1803018. DOI: 10.1371/journal.pone.0000270  PDF

271.      Traulsen, A., Nowak, M. A. & Pacheco, J. M. (2007). Stochastic payoff evaluation increases the temperature of selection. J. Theor. Biol. 244: 349-356. PMID: 16979665. PMCID: PMC1866307. DOI: 10.1016/j.jtbi.2006.08.008  PDF

272.      Traulsen, A., Pacheco, J. M. & Nowak, M. A. (2007). Pairwise comparison and selection temperature in evolutionary game dynamics. J. Theor. Biol. 246: 522-529. PMID: 17292423. PMCID: PMC2001316. DOI: 10.1016/j.jtbi.2007.01.002  PDF

273.      Willensdorfer, M., Bürger, R. & Nowak, M. A. (2007). Phenotypic mutation rates and the abundance of abnormal proteins in yeast. PLoS Comput. Biol. 3: e203. PMID: 18039025. PMCID: PMC2082502. DOI: 10.1371/journal.pcbi.0030203  PDF

 

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2008

274.      Dingli, D. & Nowak, M. A. (2008). Evolutionary dynamics of cancer. Book review of Dynamics of Cancer: Incidence, Inheritance, and Evolution, S. A. Frank. Trends Ecol. Evol. 25: 254-255. DOI: 10.1016/j.tree.2007.12.007  PDF

275.      Dreber, A. & Nowak, M. A. (2008). Gambling for global goods. Proc. Natl. Acad. Sci. U.S.A. 105: 2261-2262. PMID: 18287079. PMCID: PMC2268122. DOI:  10.1073/pnas.0800033105  PDF

276.      Dreber, A., Rand, D. G., Fudenberg, D. & Nowak, M. A. (2008). Winners don’t punish. Nature 452: 348-351. PMID: 18354481. PMCID: PMC2292414. DOI: 10.1038/nature06723  PDF & SI

277.      Fu, F., Hauert, C., Nowak, M. A. & Wang, L. (2008). Reputation-based partner choice promotes cooperation in social networks. Phys. Rev. E. 78: 026117. Republished in Virtual Journal of Biological Physics Research 165. PMID: 18850907. PMCID: PMC2699261. DOI: 10.1103/PhysRevE.78.026117 PDF

278.      Hauert, C., Traulsen, A., Brandt, H., Nowak, M. A. & Sigmund, K. (2008). Public goods with punishment and abstaining in finite and infinite populations. Biol. Theory 3: 114–122. PMID: 20740068. PMCID: PMC2927148. DOI: http://dx.doi.org/10.1162/biot.2008.3.2.114  PDF

279.      Jones, S., Chen, W., Parmigiani, G., Diehl, F., Beerenwinkel, N., Antal, T., Traulsen, A., Nowak, M. A., Siegel, C., Velculescu, V. E., Kinzler, K. W., Vogelstein, B., Willis, J., & Markowitz, S. D. (2008). Comparative lesion sequencing provides insights into tumor evolution. Proc. Natl. Acad. Sci. U.S.A. 105: 4283-4288. PMID: 18337506. PMCID: PMC2393770. DOI: 10.1073/pnas.0712345105 PDF

280.      Langer, P., Nowak, M. A. & Hauert, C. (2008). Spatial invasion of cooperation. J. Theor. Biol. 250: 634-641. PMID: 18068731. PMCID: PMC2289997. DOI: 10.1016/j.jtbi.2007.11.002  PDF

281.      Nowak, M. A. (2008). Generosity: A winner's advice. Nature 456: 579. PMID: 19052610. PMCID: PMC2711890. DOI: 10.1038/456579a  PDF

282.      Nowak, M. A. & Ohtsuki, H. (2008). Prevolutionary dynamics and the origin of evolution. Proc. Natl. Acad. Sci. U.S.A. 105: 14924-14927. PMID: 18791073. PMCID: PMC2567469. DOI: 10.1073/pnas.0806714105 PDF

283.      Ohtsuki, H. & Nowak, M. A. (2008). Evolutionary stability on graphs. J. Theor. Biol. 251: 698-707. PMID: 18295801. PMCID: PMC2430060. DOI: 10.1016/j.jtbi.2008.01.005 PDF

284.      Pacheco, J. M., Traulsen, A., Ohtsuki, H. & Nowak, M. A. (2008). Repeated games and direct reciprocity under active linking. J. Theor. Biol. 250: 723-731. PMID: 18076911. PMCID: PMC2460569. DOI: 10.1016/j.jtbi.2007.10.040 PDF

285.      Pinker, S., Nowak, M. A. & Lee, J.J. (2008). The logic of indirect speech. Proc. Natl. Acad. Sci. U.S.A. 105: 833-838. PMID: 18199841. PMCID: PMC2242675. DOI: 10.1073/pnas.0707192105  PDF

286.      Traulsen, A., Shoresh, N. & Nowak, M. A. (2008). Analytical results for individual and group selection of any intensity. Bull. Math. Biol. 70: 1410-1424. PMID: 18386099. PMCID: PMC2574888. DOI: 10.1007/s11538-008-9305-6  PDF

 

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2009

287.      Antal, T., & Nowak, M. A., & Traulsen, A. (2009). Strategy abundance in 2x2 games for arbitrary mutation rates. J. Theor. Biol. 257: 340-344. PMID: 19111558. PMCID: PMC2699184. DOI: 10.1073/pnas.0902528106  PDF

288.      Antal, T., Ohtsuki, H., Wakeley, J. Taylor, P. D. & Nowak, M. A. (2009). Evolution of cooperation by phenotypic similarity. Proc. Natl. Acad. Sci. U.S.A. 106: 8597-8600. PMID: 19416902. PMCID: PMC2688992. DOI: 10.1016/j.jtbi.2008.11.023  PDF

289.      Antal, T., Traulsen, A., Ohtsuki, H., Tarnita, C. E. & Nowak, M. A. (2009). Mutation–selection equilibrium in games with mixed strategies. J. Theor. Biol. 258: 614-622. PMID: 19248791. PMCID: PMC2684574DOI: 10.1016/j.jtbi.2009.02.010  PDF

290.      Fu, F., Wang, L., & Nowak, M. A. & Hauert, C. (2009). Evolutionary dynamics on graphs: Efficient method for weak selection. Phys. Rev. E  79: 046707. PMID: 19518380. PMCID: PMC2735202. DOI: 10.1103/PhysRevE.79.046707 PDF

291.      Gokhale, C.S., Iwasa, Y., Nowak, M. A. & Traulsen, A. (2009). The pace of evolution across fitness valleys. J. Theor. Biol. 259: 613-620. PMID: 19394348PMCID: PMC2711507. DOI: 10.1016/j.jtbi.2009.04.011  PDF

292.      Manapat, M., Ohtsuki, H., Bürger, R. & Nowak, M. A. (2009). Originator dynamics. J. Theor. Biol. 256: 586–595. PMID: 18996397PMCID: PMC2674798. DOI: 10.1016/j.jtbi.2008.10.006  PDF

293.      Nathanson, C. G., Tarnita, C. E. & Nowak, M. A. (2009). Calculating evolutionary dynamics in structured populations. PLoS Comput. Biol. 5: e1000615. PMID: 20019806. PMCID: PMC2787627. DOI: 10.1371/journal.pcbi.1000615  PDF

              Nathanson, C. G., Tarnita, C. E. & Nowak, M. A. (2010) Correction: Calculating Evolutionary Dynamics in Structured Populations. PLoS Comput. Biol. 6 (1). DOI: 10.1371/annotation/064a9048-e6f7-4cf8-b259-f40cfb6696ba  PDF

294.      Ohtsuki, H., Iwasa, Y. & Nowak, M. A. (2009). Indirect reciprocity provides only a narrow margin of efficiency for costly punishment. PMID: 19122640 PMCID: PMC2614697Nature 457: 79-82. DOI: 10.1038/nature07601  PDF & SI

295.      Ohtsuki, H. & Nowak, M. A. (2009). Prelife catalysts and replicators. Proc. Royal Soc. B. 276: 3783-3790. PMID: 19692408. PMCID: PMC2817291. DOI: 10.1098/rspb.2009.1136  PDF

296.      Rand, D. G., Dreber, A., Ellingsen, T., Fudenberg, D. & Nowak, M. A.(2009). Positive interactions promote public cooperation. Science 325: 1272-1275. PMID: 19729661PMCID: PMC2875121. DOI: 10.1126/science.1177418  PDF

297.      Rand, D. G. & Nowak, M. A. (2009). Name and shame: How reputation could save the Earth. New Scientist 204: 28-29. DOI: 10.1016/S0262-4079(09)62991-2  PDF

298.      Rand, D. G., Ohtsuki, H. & Nowak, M. A. (2009). Direct reciprocity with costly punishment: Generous tit-for-tat prevails. J. Theor. Biol. 256: 45-57. PMID: 18938180PMCID: PMC2614626DOI: 10.1016/j.jtbi.2008.09.015  PDF

299.      Tarnita, C. E., Antal, T. & Nowak, M. A. (2009). Mutation-selection equilibrium in games with mixed strategies. J. Theor. Biol. 261: 50-57. PMID: 19646453PMCID: PMC2778049. DOI: 10.1016/j.jtbi.2009.07.028  PDF

300.      Tarnita, C. E., Antal, T., Ohtsuki, H. & Nowak, M. A. (2009). Evolutionary dynamics in set structured populations. Proc. Natl. Acad. Sci. U.S.A. 106: 8601-8604. PMID: 20008382PMCID: PMC2842709. DOI: 10.1073/pnas.0903019106  PDF

301.      Tarnita, C. E., Ohtsuki, H., Antal, T., Fu, F. & Nowak, M. A. (2009). Strategy selection in structured populations. J. Theor. Biol. 259: 570-581. PMID: 19358858PMCID: PMC2710410. DOI: 10.1016/j.jtbi.2009.03.035  PDF

302.      Taylor, C. & Nowak, M. A. (2009). How to evolve cooperation. Pages 41-56. In Games, Groups, and the Global Good, ed. S. Levin. New York: Springer. DOI: 10.1007/978-3-540-85436-4_2  PDF

303.      Traulsen, A., Hauert, C., Brandt De Silva, H., Nowak, M. A. & Sigmund, K. (2009). Exploration dynamics in evolutionary games. Proc. Natl. Acad. Sci. U.S.A. 106: 709-712. PMID: 19124771PMCID: PMC2630064. DOI: 10.1073/pnas.0808450106  PDF

304.      Wakano, J. Y., Nowak, M. A. & Hauert, C. (2009). Spatial dynamics of ecological public goods. Proc. Natl. Acad. Sci. U.S.A. 106: 7910-7914. PMID: 19416839PMCID: PMC2683138DOI: 10.1073/pnas.0812644106  PDF

 

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2010

305.      Bozic, I., Antal, T., Ohtsuki, H., Carter, H., Kim, D., Chen, S., Karchin, R., Kinzler, K. W., Vogelstein, B. & Nowak, M. A. (2010). Accumulation of driver and passenger mutations during tumor progression. Proc. Natl. Acad. Sci. U.S.A. 107 (43): 18545–18550. PMID: 20876136. PMCID: PMC2972991. DOI: 10.1073/pnas.1010978107  PDF

306.      Fu, F., Nowak, M. A. & Hauert, C. (2010). Invasion and expansion of cooperators in lattice populations: Prisoner's dilemma vs. Snowdrift games. J. Theor. Biol. 266 (3): 358-366. PMID: 20619271. PMCID: PMC2927800. DOI: 10.1016/j.jtbi.2010.06.042  PDF

307.      Hill, A. L., Rand, D. G., Nowak, M. A. & Christakis, N. A. (2010). Emotions as infectious diseases in a large social network: the SISa model. Proc. Royal Soc. B. 277: 3827-3835. PMID: 20610424. PMCID: PMC2992714. DOI: 10.1098/rspb.2010.1217  PDF

308.      Hill, A. L., Rand, D. G., Nowak, M. A. & Christakis, N. A. (2010). Infectious disease modeling of social contagion in networks. PLoS Comput Biol  6: e1000968.PMID: 21079667. PMCID: PMC2973808. DOI: 10.1371/journal.pcbi.1000968  PDF

309.      Imhof, L. A & Nowak, M.A. (2010). Stochastic evolutionary dynamics of direct reciprocity. Proc. Royal Soc. B. 277(1680): 463-468. PMID: 19846456. PMCID: PMC2842638. DOI: 10.1098/rspb.2009.1171  PDF

310.      Manapat, M. L., Chen, I. A. & Nowak, M.A. (2010). The basic reproductive ratio of life. J. Theor. Biol. 263: 317-327. PMID: 20034501. PMCID: PMC2827768. DOI: 10.1016/j.jtbi.2009.12.020  PDF

311.      Nowak, M. A., Tarnita, C. E. & Antal, T. (2010). Evolutionary dynamics in structured populations. Philos. Trans. Royal Soc. B. 365: 19-30. PMID: 20008382. PMCID: PMC2842709. DOI: 10.1098/rstb.2009.0215  PDF

312.      Nowak, M. A., Tarnita, C. E. & Wilson, E. O. (2010). The evolution of eusociality. Nature 466:1057-1062. PMID: 20740005. PMCID: PMC3279739. DOI: 10.1038/nature09205  PDF

313.      Ojosnegros, S., Beerenwinkel, N., Antal, T., Nowak, M. A., Escarmis, C. & Domingo, E. (2010). Competition-colonization dynamics in an RNA virus. Proc. Natl. Acad. Sci. U.S.A. 107 (5): 2108-2112. PMID: 20080701. PMCID: PMC2836666. DOI: 10.1073/pnas.0909787107  PDF

314.      Rajamani, S., Ichida, J. K., Antal, T., Treco, D. A., Leu, K., Nowak, M. A., Szostak, J. W. & Chen, I. A. (2010). Effect of stalling after mismatches on the error catastrophe in nonenzymatic nucleic acid replication. J. Am. Chem. Soc. 132 (16): 5880–5885. PMID: 20359213. PMCID: PMC2857888. DOI: 10.1021/ja100780p  PDF

315.      Yachida, S., Jones, S., Bozic, I., Antal, T., Leary, R., Fu, B., Kamiyama, M., Hruban, R. H., Eshleman, J. R., Nowak, M. A., Velculescu, V. E., Kinzler, K.W., Vogelstein, B. & Iacobuzio-Donahue, C. A.(2010). Distant metastasis occurs late during the genetic evolution of pancreatic cancer. Nature 467: 1114– 1117. PMID: 20981102. PMCID: PMC3148940. DOI: 10.1038/nature09515  PDF & SI

 

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2011

316.      Beale, N., Rand, D. G., Battey, H., Croxson, K., May, R. M. & Nowak, M.A. (2011). Individual versus systemic risk and the Regulator’s Dilemma. Proc. Natl. Acad. Sci. U.S.A. 108 (31): 12647-12652. PMID: 21768387. PMCID: PMC3150885. DOI:  10.1073/pnas.1105882108  PDF

317.      Fu, F., Rosenbloom, D. I., Wang, L. & Nowak, M.A. (2011). Imitation dynamics of vaccination behaviour on social networks. Proc. Royal Soc. B. 278: 42-49. PMID: 20667876. PMCID: PMC2992723. DOI: 10.1098/rspb.2010.1107  PDF

318.      Michel, J. B., Shen, Y. K., Presser Aiden, A., Veres, A. & Gray, M. K. The Google Books Team, J. P. Pickett, D. Hoiberg, D. Clancy, P. Norvig, J. Orwant, S. Pinker, Nowak, M.A. & Lieberman, E.A. (2011). Quantitative analysis of culture using millions of digitized books. Science 331: 176-182. PMID: 21163965. PMCID: PMC3279742. DOI: 10.1126/science.1199644  PDF

319.      Nowak, M. A. & Highfield, R. (2011). SuperCooperators: Why We Need Each Other to Succeed. Simon & Schuster. ISBN: 9781451626636.

320.      Nowak, M. A., Tarnita, C. E. & Wilson, E. O. (2011). Nowak et al. reply. Nature 471 (7339): E9-E10. DOI: 10.1038/nature09836  PDF

321.      Rand, D. G. & Nowak, M.A. (2011). The evolution of antisocial punishment in optional public goods games. Nat. Commun. 2: 434. PMID: 21847108. PMCID: PMC3279747. DOI: 10.1038/ncomms1442  PDF

322.      Tarnita, C. E., Wage, N. & Nowak, M.A. (2011). Multiple strategies in structured populations. Proc. Natl. Acad. Sci. U.S.A. 108: 2334-2337. PMCID: PMC3038739. PMID: 21257906. DOI: 10.1073/pnas.1016008108  PDF

323.      van Veelen, M. & Nowak, M.A. (2011). Evolution: Selection for positive illusions. Nature 477: 282-283. PMID: 21921904. DOI: 10.1038/477282a  PDF

 

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2012

324.      Allen, B. & Nowak, M.A. (2012). Evolutionary shift dynamics on a cycle. J. Theor. Biol. 311: 28-39. PMID: 22814475. PMCID: PMC3434466. DOI: 10.1016/j.jtbi.2012.07.006  PDF

325.      Allen, B., Traulsen, A., Tarnita, C. E. & Nowak, M.A. (2012). How mutation affects evolutionary games on graphs. J. Theor. Biol. 299: 97-105. PMID: 21473871. PMCID: PMC3150603. DOI: 10.1016/j.jtbi.2011.03.034  PDF

326.      Bozic, I., Allen, B. & Nowak, M.A. (2012). Dynamics of targeted cancer therapy. Trends Mol. Med. 18 (6): 311-316. PMID: 22595628. PMCID: PMC3372676. DOI: 10.1016/j.molmed.2012.04.006  PDF

327.      Cavaliere, M., Sedwards, S., Tarnita, C. E., Nowak, M. A. & Csikász-Nagy, A. (2012). Prosperity is associated with instability in dynamical networks. J. Theor. Biol. 299: 126-138. PMID: 21983567. PMCID: PMC3298632. DOI: 10.1016/j.jtbi.2011.09.005  PDF

328.      Chatterjee, K., Reiter, J. G. & Nowak, M.A. (2012). Evolutionary dynamics of biological auctions. Theor. Popul. Biol. 81 (1): 69-80. PMID: 22120126. PMCID: PMC3279759. DOI: 10.1016/j.tpb.2011.11.003  PDF

329.      Chatterjee, K., Zufferey, D. & Nowak, M.A. (2012). Evolutionary game dynamics in populations with different learners. J. Theor. Biol. 301: 161-173. PMID: 22394652. PMCID: PMC3322297. DOI: 10.1016/j.jtbi.2012.02.021  PDF

330.      Chen, I. & Nowak, M.A. (2012). From prelife to life: how chemical kinetics become evolutionary dynamics. Acc. Chem. Res. 45 (12): 2088-2096. PMID: 22335792. PMCID: PMC4610729. DOI: 10.1021/ar2002683  PDF

331.      Derr, J., Manapat, M. L., Rajamani, S., Leu, K., Xulvi-Brunet, R., Joseph, I., Nowak, M. A. & Chen, I. A. (2012). Prebiotically plausible mechanisms increase compositional diversity of nucleic acid sequences. Nucl. Acids Res. 40: 4711-4722. PMID: 22319215. PMCID: PMC3378899. DOI: 10.1093/nar/gks065  PDF

332.      Diaz, Jr., L. A., Williams, R. T., Wu, J., Kinde, I., Hecht, J. R., Berlin, J., Allen, B., Bozic, I., Reiter, J. G., Nowak, M. A., Kinzler, K. W., Oliner, K. S. & Vogelstein, B. (2012). The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers. Nature 486 (7404): 537-540. PMID: 22722843. PMCID: PMC3436069. DOI: 10.1038/nature11219  PDF & SI

333.      Fu, F., Nowak, M. A., Christakis, N. A. & Fowler, J. H. (2012). The evolution of homophily. Sci. Rep. 2: 845. PMID: 23150792. PMCID: PMC3496167. DOI: 10.1038/srep00845  PDF

334.      Fu, F., Tarnita, C. E., Christakis, N. A., Wang, L., Rand, D. G. & Nowak, M.A. (2012). Evolution of in-group favoritism. Sci Rep. 2: 460. PMID: 22724059. PMCID: PMC3380441. DOI: 10.1038/srep00460  PDF

335.      Hill, A. L., Rosenbloom, D. I. S. & Nowak, M.A. (2012). Evolutionary dynamics of HIV at multiple spatial and temporal scales. J. Mol. Med. 90 (5): 543-561. PMID: 22552382. PMCID: PMC7080006. DOI: 10.1007/s00109-012-0892-1 PDF

336.      Manapat, M. L., Rand, D. G., Pawlowitsch, C. & Nowak, M.A. (2012). Stochastic evolutionary dynamics resolve the Traveler's Dilemma. J. Theor. Biol. 303: 119-127. PMID: 22465111. PMCID: PMC3348410. DOI: 10.1016/j.jtbi.2012.03.014  PDF

337.      Nowak, M. A. (2012). Evolving cooperation. J. Theor. Biol. 299: 1-8. DOI: 10.1016/j.jtbi.2012.01.014  PDF

338.      Nowak, M. A. (2012). Why we help. Sci. Am. 307: 34-39. PMID: 22779269. DOI: 10.1038/scientificamerican0712-34  PDF

339.      Rand, D. G., Greene, J. G. & Nowak, M.A. (2012). Spontaneous giving and calculated greed. Nature 489: 427-430. PMID: 22996558. DOI: 10.1038/nature11467  PDF & SI

340.      Rand, D. G. & Nowak, M.A. (2012). Evolutionary dynamics in finite populations can explain the full range of cooperative behaviors observed in the centipede game. J. Theor. Biol. 300: 212-221. PMID: 22266662. DOI:10.1016/j.jtbi.2012.01.011  PDF

341.      Rosenbloom, D. I. S, Hill, A. L., Rabi, S. A., Siliciano, R. F. & Nowak, M.A. (2012). Antiretroviral dynamics determines HIV evolution and predicts therapy outcome. Nat. Med. 18 (9): 1378-1385. PMID: 22941277. PMCID: PMC3490032. DOI: 10.1038/nm.2892  PDF & SI

342.      van Gestel, J., Nowak, M. A. & Tarnita, C. E. (2012). The evolution of cell-to-cell communication in a sporulating bacterium. PLoS Comput. Biol. 8: e1002818. PMID: 23284278. PMCID: PMC3527279.  DOI: 10.1371/journal.pcbi.1002818  PDF

343.      van Veelen, M, García, J. Rand, D. G. & Nowak, M.A. (2012). Direct reciprocity in structured populations. Proc. Natl. Acad. Sci. U.S.A. 109: 9929-9934. PMID: 22665767.  PMCID: PMC3382515. DOI: 10.1073/pnas.1206694109  PDF

344.      van Veelen, M. & Nowak, M.A. (2012). Multi-player games on the cycle. J. Theor. Biol. 292: 116-128. PMID: 21907215. PMCID: PMC3279760. DOI: 10.1016/j.jtbi.2011.08.031 PDF

 

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2013

345.      Allen, B., Gore, J. & Nowak, M.A. (2013). Spatial dilemmas of diffusible public goods. eLife 2: e01169. PMID: 24347543. PMCID: PMC3865686. DOI: 10.7554/eLife.01169  PDF

346.      Allen, B. & Nowak, M.A. (2013). Cooperation and the fate of microbial societies. PLoS Biol. 11: e1001549. PMID: 23637573. PMCID: PMC3640085. DOI: 10.1371/journal.pbio.1001549  PDF

347.      Allen, B. & Nowak, M.A. (2013). O Brave New World with Such Games. Science 341: 844-844. DOI: 10.1126/science.1241750  PDF

348.      Allen, B., Nowak, M. A. & Dieckmann, U. (2013). Adaptive dynamics with interaction structure. Am. Nat. 181 (6): E139-E163. PMID: 23669549. DOI: 10.1086/670192 PDF

349.      Allen, B., Nowak, M. A. & Wilson, E. O. (2013). Limitations of inclusive fitness. Proc. Natl. Acad. Sci. U.S.A. 110 (50): 20135-20139. PMID: 24277847. PMCID: PMC3864293. DOI: 10.1073/pnas.1317588110  PDF

350.      Bianconi, G., Zhao, K., Chen, I. & Nowak, M.A. (2013). Selection for replicases in protocells. PLoS Comput. Biol. 9 (5): e1003051. PMID: 23671413. PMCID: PMC3649988. DOI: 10.1371/journal.pcbi.1003051  PDF

351.      Bozic, I. & Nowak, M.A. (2013). Unwanted evolution. Science 342 (6161): 938-939. PMID: 24264980. DOI: 10.1126/science.1247887  PDF

352.      Bozic, I., Reiter, J. G., Allen, B., Antal, T., Chatterjee, K., Shah, P., Moon, Y. S., Yaqubie, A., Kelly, N., Le, D. T., Lipson, E. J., Chapman, P. B., Diaz Jr., L. A., Vogelstein, B. & Nowak, M.A. (2013). Evolutionary dynamics of cancer in response to targeted combination therapy. eLife 2: e00747. PMID: 23805382. PMCID: PMC3691570. DOI: 10.7554/eLife.00747  PDF

353.      Coakley, S. & Nowak, M.A., eds. (2013). Evolution, Games, and God: The Principle of Cooperation. Harvard University Press. ISBN: 9780674047976.

354.      Ellingsen, T., Herrmann, B., Nowak, M. A., Rand, D. G. & Tarnita, C. E. (2013). Civic capital in two cultures: The nature of cooperation in Romania and USA. IDEAS Working Paper Series from RePEc, St. Louis. DOI: 10.2139/ssrn.2179575  PDF

355.      Fu, F. & Nowak, M.A. (2013). Global migration can lead to stronger spatial selection than local migration. J. Stat. Phys. 151: 637-653. PMID: 23853390. PMCID: PMC3706309. DOI: 10.1007/s10955-012-0631-6  PDF

356.      Hilbe, C., Nowak, M. A. & Sigmund, K. (2013). The evolution of extortion in iterated Prisoner's Dilemma games. Proc. Natl. Acad. Sci. U.S.A. 110 (17): 6913–6918. PMID: 23572576. PMCID: PMC3637695. DOI: 10.1073/pnas.1214834110  PDF

357.      Hilbe, C., Nowak, M. A. & Traulsen, A. (2013). Adaptive dynamics of extortion and compliance. PLoS ONE 8: e77886. PMID: 24223739. PMCID: PMC3815207. DOI: 10.1371/journal.pone.0077886  PDF

358.      Manapat , M. L., Nowak, M. A., & Rand, D. G. (2013). Information, irrationality, and the evolution of trust. J. Econ. Behav. Organ. 90 (Suppl): S57–S75. DOI: 10.1016/j.jebo.2012.10.018  PDF

359.      Novak, S., Chatterjee, K. & Nowak, M.A. (2013). Density games. J. Theor. Biol. 334: 26-34. PMID: 23770399. PMCID: PMC3753514. DOI: 10.1016/j.jtbi.2013.05.029  PDF

360.      Randles, A. P., Rand, D. G., Lee, C., Morrisett, G., Sircar, J., Nowak, M. A. & Pfister, H. (2013). Massively parallel model of extended memory use in evolutionary game dynamics. IPDPS: 1217-1228. DOI: 10.1109/IPDPS.2013.102  PDF

361.      Rand, D. G., Greene, J. D. & Nowak, M.A. (2013). Rand et al. reply. Nature 498 (7452): E2-E3. DOI: 10.1038/nature12195  PDF

362.      Rand, D. G. & Nowak, M.A. (2013). Human cooperation. Trends Cogn. Sci. 17 (8): 413-425. PMID: 23856025. DOI: 10.1016/j.tics.2013.06.003  PDF

363.      Rand, D. G., Tarnita, C. E., Ohtsuki, H., & Nowak, M.A. (2013). Evolution of fairness in the one-shot anonymous Ultimatum Game. Proc. Natl. Acad. Sci. U.S.A. 110: 2581-2586. PMID: 23341593. PMCID: PMC3574936. DOI: 10.1073/pnas.1214167110  PDF

364.      Reiter, J. G., Bozic, I., Allen, B., Chatterjee, K. & Nowak, M.A.. (2013). The effect of one additional driver mutation on tumor progression. Evol. Appl. 6 (1): 34-45. PMID: 23396615. PMCID: PMC3567469. DOI: 10.1111/eva.12020  PDF

365.      Reiter, J. G., Bozic, I., Chatterjee, K. & Nowak, M.A. (2013). TTP: Tool for Tumor Progression. Lect. Notes Comput. Sci. 8044: 101-106. DOI: 10.1007/978-3-642-39799-8_6  PDF

366.      Suchow, J. W., Allen, B., Nowak, M. A. & Alvarez, G. A. (2013). Evolutionary dynamics of visual memory. J. Vis. 13(9): 20. DOI: 10.1167/13.9.20  

367.      Tarnita, C. E., Taubes, C. H. & Nowak, M.A. (2013). Evolutionary construction by staying together and coming together. J. Theor. Biol. 320: 10-22. PMID: 23206384. DOI: 10.1016/j.jtbi.2012.11.022  PDF

368.      Yoeli, E., Hoffman, M., Rand, D. G. & Nowak, M.A. (2013). Powering up with indirect reciprocity in a large-scale field experiment. Proc. Natl. Acad. Sci. U.S.A. 110 (Suppl 2): 10424-10429. PMID: 23754399. PMCID: PMC3690615. DOI: 10.1073/pnas.1301210110  PDF

369.      Zagorsky, B. M., Reiter, J. G., Chatterjee, K. & Nowak, M.A. (2013). Forgiver triumphs in alternating Prisoner's Dilemma. PLoS ONE 8 (12): e80814. PMID: 24349017. PMCID: PMC3861238. DOI: 10.1371/journal.pone.0080814  PDF

 

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2014

370.      Adlam, B. & Nowak, M.A. (2014). Universality of fixation probabilities in randomly structured populations. Nature Sci. Rep. 4: 6692. PMID: 25346111. PMCID: PMC4209402. DOI: 10.1038/srep06692  PDF

371.      Allen, B. & Nowak, M.A. (2014). Games on graphs. EMS Surv. Math. Sci. 1(1): 115-151. DOI: 10.4171/EMSS/3

372.      Bozic, I. & Nowak, M.A. (2014). Timing and heterogeneity of mutations associated with drug-resistance in metastatic cancers. Proc. Natl. Acad. Sci. U.S.A. 111: 15964-15968. PMID: 25349424. PMCID: PMC4234551. DOI: 10.1073/pnas.1412075111  PDF

373.      Chatterjee, K., Pavlogiannis, A., Adlam, B. & Nowak, M.A. (2014). The time scale of evolutionary innovation. PLoS Comput. Biol. 10(9): e1003818. PMID: 25211329. PMCID: PMC4161296. DOI: 10.1371/journal.pcbi.1003818  PDF

374.      Fu, F., Kocher, S. D. & Nowak, M.A. (2014). The risk-return trade-off between solitary and eusocial reproduction. Ecol. Lett. 18(1): 74-84. PMID: 25417761. PMCID: PMC5492949. DOI: 10.1111/ele.12392  PDF

375.      Ghang, W. & Nowak, M.A. (2014). Stochastic evolution of staying together. J. Theor. Biol. 360: 129-136. PMID: 24992234. DOI: 10.1016/j.jtbi.2014.06.026PDF

376.      Hauser, O. P., Nowak, M. A. & Rand, D. G. (2014). Punishment does not promote cooperation under exploration dynamics when anti-social punishment is possible. J. Theor. Biol. 360: 163-171. PMID: 25014473. DOI: 10.2139/ssrn.2298851  PDF

377.      Hauser, O. P., Rand, D. G., Peysakhovich, A. & Nowak, M.A. (2014). Cooperating with the future. Nature 511: 220-223. PMID: 25008530. DOI: 10.1038/nature13530  PDF & SI

378.      Hauser, O. P., Traulsen, A. & Nowak, M.A. (2014). Heterogeneity in background fitness acts as a suppressor of selection. J. Theor. Biol. 343:178-185. PMID: 24211522. DOI: 10.1016/j.jtbi.2013.10.013  PDF

379.      Hilbe, C., Wu, B., Traulsen, A. & Nowak, M.A. (2014). Cooperation and control in multiplayer social dilemmas. Proc. Natl. Acad. Sci. U.S.A. 111: 16425-16430. PMID: 25349400. PMCID: PMC4246307. DOI: 10.1073/pnas.1407887111  PDF

380.      Hill, A. L. & Nowak, M.A. (2014). Mind over matter. Trends Ecol. Evol. 29(2):74-75. DOI: 10.1016/j.tree.2013.10.004    PDF

381.      Hill, A. L., Rosenbloom, D. L. S., Fu, F., Nowak, M. A. & Siliciano, R. F. (2014). Predicting the outcomes of treatment to eradicate the latent reservoir for HIV-1. Proc. Natl. Acad. Sci. U.S.A. 111: 37:134756-13480. PMID: 25097264. PMCID: PMC4169952. DOI: 10.1073/pnas.1406663111  PDF

382.      Humplik, J., Hill, A. L. & Nowak, M.A. (2014). Evolutionary dynamics of infectious diseases in finite populations. J. Theor. Bio. 360: 149-162. PMID: 25016046. DOI: 10.1016/j.jtbi.2014.06.039    PDF

383.      Jeong, H-C., Oh, S-Y., Allen, B. & Nowak, M.A. (2014). Optional games on cycles and complete graphs. J. Theor. Biol. 356(7): 98-112. PMID: 24780293. DOI: 10.1016/j.jtbi.2014.04.025    PDF

384.      Kocher, S. D., Pellissier, L., Veller, C., Purcell, J., Nowak, M. A., Chapuisat, M. & Pierce, N. E. (2014). Transitions in social complexity along elevational gradients reveal a combined impact of season length and development time on social evolution. Proc. Royal Soc. B. 281: 20140627. PMID: 24870045. PMCID: PMC4071548. DOI: 10.1098/rspb.2014.0627  PDF

385.      Markvoort, A. J., Sinai, S. & Nowak, M.A. (2014). Computer simulations of cellular group selection reveal mechanism for sustaining cooperation. J. Theor. Biol. 357: 123-133. PMID: 24799131. DOI: 10.1016/j.jtbi.2014.04.029  PDF

386.      Olejarz, J. W. & Nowak, M.A.(2014). Evolution of staying together in the context of diffusible public goods. J. Theor. Biol. 360:1-12. PMID: 24992231. DOI: 10.1016/j.jtbi.2014.06.023  PDF

387.      Peysakhovich, A., Nowak, M. A. & Rand, D. G. (2014). Humans display a 'cooperative phenotype' that is domain general and temporally stable. Nature Commun. 5:4939. PMID: 25225950. DOI: 10.1038/ncomms5939    PDF

388.      Rand, D. G., Dreber, A., Haque, O. S., Kane, R. J., Nowak, M. A. & Coakley, S. (2014). Religious motivations for cooperation: an experimental investigation using explicit primes. Religion Brain Behav. 4 (1):31-48. DOI: 10.2139/ssrn.2123243  PDF

389.      Rand, D. G., Peysakhovich, A., Kraft-Todd, G. T., Newman, G. E., Wurzbacher, O., Nowak, M. A. & Greene, J. D. (2014). Social heuristics shape intuitive cooperation. Nat. Commun. 5: 1-12. PMID: 24751464. DOI: 10.1038/ncomms4677  PDF

390.      Szabó, G., Bodó, K. S., Allen, B. & Nowak, M.A. (2014). Fourier decomposition of payoff matrix for symmetric three-strategy games. Phys. Rev. E 90 (4), 042811. PMID: 25375553. DOI: 10.1103/PhysRevE.90.042811    PDF

391.      Rand, D. G., Nowak, M. A., Fowler, J. H. & Christakis, N. A. (2014). Static network structure can stabilize human cooperation. Proc. Natl. Acad. Sci. U.S.A. 111(48):17093-17098. PMID: 25404308. PMCID: PMC4260616. DOI: 10.1073/pnas.1400406111  PDF

392.      Wilson, E. O. & Nowak, M.A. (2014). Natural selection drives the evolution of ant lifecycles. Proc. Natl. Acad. Sci. U.S.A. 111(35): 12585-12590. PMID: 25114217. PMCID: PMC4156705DOI: 10.1073/pnas.1405550111  PDF

 

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2015

393.      Adlam, B., Chatterjee, K. & Nowak, M.A. (2015). Amplifiers of Selection. Proc. Royal Soc. A. 471(2181). DOI: 10.1098/rspa.2015.0114  PDF

394.      Allen, B., Sample, C., Dementieva, Y. A., Medeiros, R. C., Paoletti, C. & Nowak, M.A.(2015). The molecular clock of neutral evolution can be accelerated or slowed by asymmetric spatial structure. PLoS Comput. Biol. 11(2): e1004108. PMID: 25719560. PMCID: PMC4342344. DOI: 10.1371/journal.pcbi.1004108  PDF

395.      Allen, B. & Nowak, M.A. (2015). Games among relatives revisited. J. Theor. Biol. 378: 103-116. PMID: 25953388. DOI: 10.1016/j.jtbi.2015.04.031  PDF

396.      Antal, T., Krapivsky, P. L. & Nowak, M.A. (2015). Spatial evolution of tumors with successive driver mutations. Phys. Rev. E 92(2), 022705. PMID: 26382430. DOI: 10.1103/PhysRevE.92.022705  PDF

397.      Fu, F., Nowak M. A. & Bonhoeffer, S. (2015). Spatial heterogeneity in drug concentrations can facilitate the emergence of resistance to cancer therapy. PLoS Comput. Biol. 11(3): e1004142. PMID: 25789469. PMCID: PMC4366398. DOI: 10.1371/journal.pcbi.1004142  PDF

398.      Ghang W. & Nowak, M.A. (2015). Indirect reciprocity with optional interactions. J. Theor. Biol. 365: 1-11. PMID: 25305556. DOI: 10.1016/j.jtbi.2014.09.036  PDF

399.      Hilbe, C., Hoffman, M. & Nowak, M.A. (2015). Cooperate without looking in a non-repeated game. Games 6(4), 458-472. DOI: 10.3390/g6040458  PDF

400.      Hilbe, C., Wu, B., Traulsen, A. & Nowak, M.A. (2015). Evolutionary performance of zero-determinant strategies in multiplayer games. J. Theor. Biol. 374: 115-124. PMID: 25843220. PMCID: PMC4425415. DOI: 10.1016/j.jtbi.2015.03.032  PDF

401.      Hoffman, M., Yoeli, E. & Nowak, M.A. (2015). Cooperate without looking: Why we care what people think and not just what they do. Proc. Natl. Acad. Sci. U.S.A. 112(6), 1727-1732. PMID: 25624473. PMCID: PMC4330730. DOI: 10.1073/pnas.1417904112  PDF

402.      Hoffman, M., Suetens, S., Gneezy, U. & Nowak, M.A. (2015) An experimental investigation of evolutionary dynamics in the Rock-Paper-Scissors game. Sci. Rep. 5, 8817. PMID: 25743257. PMCID: PMC4351537DOI: 10.1038/srep08817  PDF

403.      Ibsen-Jensen R, Chatterjee, K. & Nowak, M.A. (2015). Computational complexity of ecological and evolutionary spatial dynamics. Proc. Natl. Acad. Sci. U.S.A. ePub 7 Dec 2015. PMID: 26644569. PMCID: PMC4697423. DOI: 10.1073/pnas.1511366112  PDF

404.      Landau, D., Tausch, E., Taylor-Weiner, A. N., Stewart, C., Reiter, J. G., Bahlo, J., Kluth, S., Bozic, I., Lawrence, M., Böttcher, S., Carter, S. L., Cibulskis, K., Mertens, D., Sougnez, C. L., Rosenberg, M., Hess, J. M., Edelmann, J., Kless, S., Kneba, M., Ritgen, M., A., Fischer, K., Gabriel, S., Lander, E. S., Nowak, M. A., Döhner, H., Hallek, M., Neuberg, D., Getz, G., Stilgenbauer, S. & Wu, C. J. (2015). Mutations driving CLL and their evolution in progression and relapse. Nature 526: 525-530. PMID: 26466571. PMCID: PMC4815041. DOI: 10.1038/nature15395  PDF

405.      Leventhal, G., Hill, A. L., Nowak, M. A. & Bonhoeffer, S. (2015). Evolution and emergence of infectious diseases on theoretical and real-world networks. NatCommun. 6(6101). PMID: 25592476. PMCID: PMC4335509. DOI: 10.1038/ncomms7101  PDF

406.      Misale, S., Bozic, I., Tong, J., Peraza-Penton, A., Lallo, A., Baldi, F., Lin, K., Trusolino, L., Bertotti, A., Di Nicolantonio, F., Nowak, M. A., Zhang, L., Wood, K. & Bardelli, A. (2015). Vertical suppression of the EGFR pathway prevents onset of resistance in colorectal cancers. NatCommun. 6(8305). PMID: 26392303. PMCID: PMC4595628. DOI: 10.1038/ncomms9305  PDF

407.      Moreno-Gámez, S., Hill, A. L., Rosenbloom, D. I. R, Petrov, D., Nowak M. A. & Pennings, P. (2015). Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multi-drug resistance. Proc. Natl. Acad. Sci. U.S.A. 112(22) E2874-E2883. PMID: 26038564. PMCID: PMC4460514. DOI: 10.1073/pnas.1424184112  PDF

408.      Nowak, M. A. (2015). Obituary: John Forbes Nash (1928 - 2015). Nature 522:420. DOI: 10.1038/522420a  PDF

409.      Nowak, M. A. & Allen, B. (2015). Inclusive Fitness Theorizing Invokes Phenomena That Are Not Relevant for the Evolution of Eusociality. PLoS Biol. 13(4): e1002134. PMID: 25909914. PMCID: PMC4409106. DOI: 10.1371/journal.pbio.1002134  PDF

410.      Ohtsuki, H., Iwasa, Y. & Nowak, M. A. (2015). Reputation effects in public and private interactions. PLOS Comp. Biol. 11(11): e1004527. PMID: 26606239. PMCID: PMC4659694. DOI: 10.1371/journal.pcbi.1004527  PDF

411.      Olejarz, J., Allen, B., Veller, C. & Nowak, M. A.(2015). The evolution of non-reproductive workers in insect colonies with haplodiploid genetics. eLife 4:e08918. PMID: 26485033. PMCID: PMC4755779. DOI: 10.7554/eLife.08918  PDF

412.      Olejarz, J., Ghang, W. & Nowak, M. A. (2015). Indirect Reciprocity with Optional Interactions and Private Information. Games 6(4), 438-457. DOI: 10.3390/g6040438  PDF

413.      Pavlogiannis, A., Chatterjee, K., Adlam, B. & Nowak, M. A. (2015). Cellular cooperation with shift updating and repulsion. Sci Rep. 5:17147. PMID: 26602306. PMCID: PMC4667539. DOI: 10.1038/srep17147  PDF

414.      Rand, D. G. & Nowak, M. A. (2015). Cooperation among humans. In Global Cooperation and the Human Factor in International Relations. Ed. Dirk Messner, Ed. Silke Weinlich. New York: Routledge, 113-138. Print. DOI: 10.4324/9781315691657  PDF

415.      Reiter, J. G., Kanodia, A., Gupta, R., Nowak, M. A. & Chatterjee, K. (2015). Biological auctions with multiple rewards. Proc. Royal Soc. B. 282: 20151041. PMID: 26180069. PMCID: PMC4528522. DOI: 10.1098/rspb.2015.1041  PDF

416.      Szabó, G., Bodó, K. S., Allen, B. & Nowak, M. A. (2015). Four classes of interactions for evolutionary games. Phys. Rev. E 92(2). PMID: 26382467. DOI: 10.1103/PhysRevE.92.022820  PDF

417.      Tomasetti, C., Marchionni, L., Nowak, M. A., Parmigiani, G. & Vogelstein, B. (2015). Only three driver gene mutations are required for development of lung and colorectal cancers. Proc. Natl. Acad. Sci. U.S.A. 112(1):118-123. PMID: 25535351. PMCID: PMC4291633. DOI: 10.1073/pnas.1421839112  PDF

418.      Veller, C,. Nowak, M. A. & Davis, C. C. (2015). Extended flowering intervals of bamboos evolved by discrete multiplication. Ecol. Lett. 18(7):653-9. PMID: 25963600. DOI: 10.1111/ele.12442  PDF

419.      Vukov, J., Varga, L., Allen, B., Veller, C., Nowak, M. A. & Szabó, G. (2015). Payoff components and their effects in a spatial three-strategy evolutionary social dilemma. Phys. Rev. E  92, 012813. PMID: 26274231. DOI: 10.1103/PhysRevE.92.012813  PDF

420.      Waclaw, B., Bozic, I., Pittman, M. E., Rhuban, R. H., Vogelstein, B. & Nowak, M.A. (2015). A spatial model predicts that dispersal and cell turnover limit intratumour heterogeneity. Nature 525(7568):261-4. PMID: 26308893. PMCID: PMC4782800. DOI: 10.1038/nature14971  PDF & SI

 

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2016

421.      Allen, B. & Nowak, M.A. (2016). There is no inclusive fitness at the level of the individual. Curr. Opin. Behav. Sci. 12: 122-128. DOI: 10.1016/j.cobeha.2016.10.002  PDF

422.      Baek, S. K.,Jeong, H. C., Hilbe, C. & Nowak, M.A. (2016). Comparing reactive and memory-one strategies of direct reciprocity. Sci. Rep. 6 (25676). PMID: 27161141. PMCID: PMC4861973. DOI: 10.1038/srep25676  PDF

423.      Bozic I, Gerold, J. M. & Nowak, M.A. (2016). Quantifying clonal and subclonal passenger mutations in cancer evolution. PLoS Comput. Biol. 12: e1004731. PMID: 26828429. PMCID: PMC4734774. DOI: 10.1371/journal.pcbi.1004731  PDF & SI

424.      Burger, J. A., Landau, D. A., Taylor-Weiner, A., Bozic, I., Zhang, H., Sarosiek, K., Wang, L., Stewart, C., Fan, J., Hoellenriegel, J., Sivina, M., Dubuc, A. M., Fraser, C., Han, Y., Li, S., Livak, K. J., Zou, L., Wan, Y., Konoplev, S., Sougnez, C., Brown, J. R., Abruzzo, L.V., Carter, S. L., Keating, M. J., Davids, M. S., Wierda, W. G., Cibulskis, K., Zenz, T., Werner, L., Dal Cin, P., Kharchencko, P., Neuberg, D., Kantarjian, H., Lander, E., Gabriel, S., O’Brien, S., Letai, A., Weitz, D. A., Nowak, M.A., Getz, G. & Wu, C.J. (2016). Clonal evolution in patients with chronic lymphocytic leukaemia developing resistance to BTK inhibition. Nat Commun. 7(11589). PMID: 27199251. PMCID: PMC4876453. DOI: 10.1038/ncomms11589  PDF & SI

425.      Chen, Y., McAvoy, A. & Nowak, M.A. (2016). Fixation probabilities for any configuration of two strategies on regular graphs. Sci. Rep. 6:39181. PMID: 28004806. PMCID: PMC5177945. DOI: 10.1038/srep39181  PDF

426.      van Gestel, J. & Nowak, M.A. (2016). Phenotypic heterogeneity and the evolution of bacterial life cycles. PLoS Comput. Biol. 12(2): e1004764. PMID: 26894881. PMCID: PMC4760940. DOI: 10.1371/journal.pcbi.1004764  PDF

427.      Hauser, O., Hendriks, A., Rand, D. G. & Nowak, M.A. (2016). Think global, act local: Preserving the global commons. Sci. Rep. 6:36079. PMID: 27808222. PMCID: PMC5093714. DOI: 10.1038/srep36079  PDF

428.      Kaveh, K., Veller, C. & Nowak, M.A. (2016). Games of multicellularity. J. Theor. Bio. 403:143-158. PMID: 27179461. PMCID: PMC5093714. DOI: 10.1016/j.jtbi.2016.04.037  PDF

429.      Olejarz, J., Allen, B., Veller, C., Gadagkar, R. & Nowak, M.A. (2016). Evolution of worker policing. J. Theor. Bio. 399: 103-116. PMID: 26976051. DOI: 10.1016/j.jtbi.2016.03.001  PDF

430.      Paterson, C., Nowak, M. A. & Waclaw, B. (2016). An exactly solvable, spatial model of mutation accumulation in cancer. Sci. Rep. 6:39511. PMID: 28004754. PMCID: PMC5177951. DOI: 10.1038/srep39511  PDF

431.      Rand, D. G., Jordan, J., Hoffman, M. & Nowak, M.A. (2016). Uncalculating cooperation is used to signal trustworthiness. Proc. Natl. Acad. Sci. U.S.A. epub 21 July 2016. PMID: 27439873. PMCID: PMC4978259. DOI: 10.1073/pnas.1601280113  PDF

432.      Reiter, J. G., Makohon-Moore, A., Gerold, J., Bozic, I., Chatterjee, K., Iacobuzio-Donahue, C., Vogelstein, B. & Nowak, M.A. (2016). Reconstructing the evolutionary history of metastatic cancers. Cancer Res. 76(14 Supplement), 2374-2374. DOI: 10.1158/1538-7445.AM2016-2374  PDF

433.      Veller, C., Haig, D. & Nowak, M.A. (2016). The Trivers-Willard hypothesis: sex ratio or investment? Proc. Royal Soc. B. 283: 20160126. PMID: 27170721. PMCID: PMC4874707. DOI: 10.1098/rspb.2016.0126  PDF

434.      Yamamoto, Y., Offord, C. P., Kimura, G., Kuribayashi, S., Takeda, H., Tsuchiya, S., Shimojo, H., Kanno, H., Bozic, I., Nowak, M. A., Bajzer, Ž. & Dingli, D. (2016). Tumor and immune cell dynamics explain the PSA bounce after prostate cancer brachytherapy. Br. J. Cancer 115: 195–202. PMID: 27404586. PMCID: PMC494769. DOI:10.1038/bjc.2016.171  PDF & SI

435.      Yeates, J. A. M., Hilbe, C., Zwick, M., Nowak, M. A. & Lehman, N. (2016). Dynamics of prebiotic RNA reproduction illuminated by chemical game theory. Proc. Natl. Acad. Sci. U.S.A. PMID: 27091972. PMCID: PMC4983821. DOI: 10.1073/pnas.1525273113  PDF

 

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2017

436.      Allen, B., Lippner, G., Chen, Y-T., Fotouhi, B., Momeni, N., Yau, S-T. & Nowak, M.A. (2017). Evolutionary dynamics on any population structure. Nature 544: 227–230. PMID: 28355181. DOI: 10.1038/nature21723  PDF & SI

437.      Altrock, P. M., Traulsen, A. & Nowak, M.A. (2017). Evolutionary games on cycles with strong selection. Phys. Rev. E 95 : 022407. PMID: 28297871. DOI: 10.1103/PhysRevE.95.022407  PDF

438.      Bozic, I. & Nowak, M.A. (2017). Resisting Resistance. Annu. Rev. Cancer Biol. 2017 1:10.1–10.19. DOI: 10.1146/annurev-cancerbio-042716-094839  PDF

439.      Chatterjee, K., Ibsen-Jensen, R. & Nowak, M.A. (2017). Faster Monte-Carlo Algorithms for Fixation Probability of the Moran Process. In K. G. Larsen, H. L. Bodlaender, J-F. Raskin (eds.), 42nd International Symposium on Mathematical Foundations of Computer Science (MFCS 2017), 61:1--61:13. Dagstuhl, Germany: Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik. DOI: 10.4230/LIPIcs.MFCS.2017.61  PDF

440.      Hilbe, C., Martinez-Vaquero, L. A., Chatterjee, K. & Nowak, M.A. (2017). Memory-n strategies of direct reciprocity. Proc. Natl. Acad. Sci. U.S.A. 114 (18): 4715-4720. PMID: 28420786. PMCID: PMC5422766. DOI: 10.1073/pnas.1621239114  PDF & SI 

441.      Kinsler, G., Sinai, S., Lee, N. K. & Nowak, M.A. (2017). Prebiotic selection for motifs in a model of template-free elongation of polymers within compartments. PLoS ONE 12(7): e0180208. PMID: 28723913. PMCID: PMC5516967. DOI: 10.1371/journal.pone.0180208  PDF

442.      Knoll, A. & Nowak, M.A. (2017). The Timetable of Evolution. Sci. Adv. 3(5): e1603076. PMID: 28560344. PMCID: PMC5435417. DOI: 10.1126/sciadv.1603076  PDF

443.      Krieger, M., McAvoy, A. & Nowak, M.A. (2017). Effects of motion in structured populations. J. Royal Soc. Interface 14(135). PMID: 28978749. PMCID: PMC5665834. DOI: 10.1098/rsif.2017.0509  PDF & SI

444.      Makohon-Moore, A. P., Zhang, M., Reiter, J. G., Bozic, I., Allen, B., Kundu, D., Chatterjee, K., Wong, F., Jiao, Y., Kohutek, Z. A., Hong, J., Attiyeh, M., Javier, B., Wood, L. D., Hruban, R. H., Nowak, M. A., Papadopoulos, N., Kinzler, K. W., Vogelstein, V. & Iacobuzio-Donahue, C. A. (2017). Limited heterogeneity of known driver gene mutations among the metastases of individual pancreatic cancer patients. Nat. Genet. PMID: 28092682. PMCID: PMC5663439. DOI: 10.1038/ng.3764  PDF & SI

445.      Naxerova, K., Reiter, J. G., Brachtel, E., Lennerz, J. K., van de Wetering, M., Rowan, A., Cai, T., Clevers, H., Swanton, C., Nowak, M. A., Elledge, S. J. & Jain, R. K. (2017). Origins of lymphatic and distant metastases in human colorectal cancer. Science 357(6346): 55-60. PMID: 28684519. PMCID: PMC5536201. DOI: 10.1126/science.aai8515  PDF & SI

446.      Noble, C., Olejarz, J., Esvelt, K., Church, G. & Nowak, M.A. (2017). Evolutionary dynamics of CRISPR gene drives. Sci. Adv. 3: e1601964. PMID: 28435878. PMCID: PMC5381957. DOI: 10.1126/sciadv.1601964  PDF & SI

447.      Nowak, M. A., Allen, B., McAvoy, A. & Wilson, E. O. (2017). The general form of Hamilton’s rule makes no predictions and cannot be tested empirically. Proc. Natl. Acad. Sci. U.S.A. 114 (22): 5665-5670. PMID: 28512224. PMCID: PMC5465884. DOI: 10.1073/pnas.1701805114  PDF

448.      Nowak, M. A. & Waclaw, B. (2017). (2017). Genes, environment, and "bad luck". Science 355 (6331): 1266-1267. PMID: 28336626. DOI: 10.1126/science.aam9746  PDF

449.      Nowak, M. A. & Sigmund, K. (2017). How Virtue Was Born. Gerontology epub 6 Dec 2017. PMID: 29207393. DOI: 10.1159/000484479  PDF

450.      Olejarz, J., Veller, C. & Nowak, M.A. (2017). The evolution of queen control over worker reproduction in the social Hymenoptera. Ecol. Evol. epub 10 Sep 2017. PMID: 29075460. PMCID: PMC5648666. DOI: 10.1002/ece3.3324  PDF

451.      Pavlogiannis, A., Tkadlec, J., Chatterjee, K. & Nowak, M.A.(2017). Amplification on Undirected Population Structures: Comets Beat Stars. Sci. Rep. 7(82). PMID: 28250441. PMCID: PMC5427850. DOI: 10.1038/s41598-017-00107-w  PDF & SI

452.      Priklopil, T., Chatterjee, K. & Nowak, M.A. (2017). Optional interactions and suspicious behaviour facilitates trustful cooperation in prisoners dilemma. J. Theor. Bio. epub 1 Sep 2017. PMID: 28867224. DOI: 10.1016/j.jtbi.2017.08.025  PDF

453.      Reiter, J. G., Makohon-Moore, A., Gerold, J., Bozic, I., Chatterjee, K., Iacobuzio-Donahue, C., Vogelstein, V. & Nowak, M.A. (2017). Reconstructing metastatic seeding patterns of human cancers. Nat. Commun. 8(14114). PMID: 28139641. PMCID: PMC5290319. DOI: 10.1038/ncomms14114  PDF & SI

454.      Sinai, S., Kelsic, E., Church, G. M. & Nowak, M.A. (2017). Variational auto-encoding of protein sequences. DOI: https://arxiv.org/abs/1712.03346 (NIPS workshop MLCB oral presentation)  PDF

455.      Veller, C., Hayward, L. K., Hilbe, C. & Nowak, M.A. (2017). The Red Queen and King in finite populations. Proc. Natl. Acad. Sci. U.S.A. 114(27): E5396-E5405. PMID: 28630336. DOI: 10.1073/pnas.1702020114  PDF

456.      Veller, C., Muralidhar, P., Constable, G. W. A. & Nowak, M.A. (2017). Drift-induced selection between male and female heterogamety. Genetics 207(2). PMID: 28821587. DOI: 10.1534/genetics.117.300151 PDF & SI

 

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2018

457.      Fotouhi, B., Momeni, N., Allen, B. & Nowak, M.A. (2018). Conjoining uncooperative societies facilitates evolution of cooperation. Nat. Hum. Behav. 2: 492-499. PMID: 31097804. DOI: 10.1038/s41562-018-0368-6  PDF & SI

458.      Hilbe, C., Schmid, L., Tkadlec, J., Chatterjee, K. & Nowak, M.A. (2018). Indirect reciprocity with private, noisy, and incomplete information. Proc. Natl. Acad. Sci. U.S.A. 115(48): 12241– 12246. PMID: 30429320. DOI: 10.1073/pnas.1810565115  PDF & SI

459.      Hilbe, C., Šimsa, Š., Chatterjee, K. & Nowak, M.A. (2018). Evolution of cooperation in stochastic games. Nature 246(559): 246-249. PMID: 29973718. DOI: 10.1038/s41586-018-0277-x  PDF & SI

460.      Hilbe, C., Chatterjee, K. & Nowak, M.A. (2018). Partners and rivals in direct reciprocity. Nat. Hum. Behav. 2: 4690477. PMID: 31097794. DOI: 10.1038/s41562-018-0320-9  PDF & SI

461.      Hill A. L., Rosenbloom, D. I. S., Nowak, M. A. & Silciano, R. F. (2018). Insight into treatment of HIV infection from viral dynamics models. Immunol. Rev. 285: 9-25. PMID: 30129208. DOI: 10.1111/imr.12698  PDF 

462.      Hoffman, M., Hilbe C. & Nowak, M.A. (2018). The signal-burying game can explain why we obscure positive traits and good deeds. Nat. Hum. Behav.  2: 397–404. PMID: 31024160. DOI: 10.1038/s41562-018-0354-z  PDF & SI

463.      Ibsen-Jensen, R., Tkadlec, J., Chatterjee, K. & Nowak, M.A. (2018). Language acquisition with communication between learners. J. Royal Soc. Interface 15: 20180073. PMID: 29593089. DOI: 10.1098/rsif.2018.0073  PDF

464.      Kirtane, A. R., Abouzid, O., Minahan, D., Bensel, T., Hill, A. L., Selinger, C., Bershteyn, A., Mo ,S. S., Craig, M., Mazdiyasni, H., Cleveland, C., Rogner, J., Lee, Y. A. L., Booth, L., Javid, F., Wu, S. J., Grant, T., Bellinger, A. M., Nikolic, B., Hayward, A., Wood, L., Eckhoff, P. A., Nowak, M. A., Langer, R. & Traverso, G. (2018). Development of an oral once-weekly drug delivery system for HIV antiretroviral therapy. Nat. Commun. 9(2). PMID: 29317618. DOI: 10.1038/s41467-017-02294-6  PDF

465.      Makohon-Moore, A. P., Matsukuma, K., Zhang, M., Reiter, J. G., Gerold, J. M., Jiao, Y., Sikkema, L., Attiyeh, M. A., Yachida, S., Sandone, C., Hruban, R. H., Klimstra, D. S., Papadopoulos, N., Nowak, M. A., Kinzler, K. W., Vogelstein, B. & Iacobuzio-Donahue, C.A.  (2018). Precancerous neoplastic cells can move through the pancreatic ductal system. Nature  561201–205. PMID: 30177826. DOI: 10.1038/s41586-018-0481-8  PDFSI

466.      McAvoy, A., Adlam, B., Allen, B. & Nowak, M.A. (2018). Stationary frequencies and mixing times for neutral drift processes with spatial structure. Proc. Royal Soc. A. 474: 20180238. PMCID: PMC6237506. DOI: 10.1098/rspa.2018.0238  PDF

467.      McAvoy, A., Hauert, C., Wakeley, J., Nowak, M. A. & Fraiman, N. (2018). Public goods games in populations with fluctuating size. Theor. Popul. Biol. 121: 72-84. PMID: 29408219. DOI: 10.1016/j.tpb.2018.01.004  PDF

468.      Neagu, I. A., Freeman, M., Olejarz, J., Nowak, M. A. & Hill, A. L. (2018). Life Cycle Synchronization as a Viral Drug Resistance Mechanism. PLOS Comput. Bio.14 (2), e1005947. PMID: 29447150. DOI: 10.1371/journal.pcbi.1005947  PDF & SI

469.      Noble, C., Adlam, B., Church, G. M., Esvelt, K. M. & Nowak, M.A. (2018). Current CRISPR gene drive systems are likely to be highly invasive in wild populations. eLife 7: e33423. PMID: 29916367. DOI: 10.7554/eLife.33423  PDF

470.      Olejarz, J., Kaveh, K., Veller, C. & Nowak, M.A. (2018). Selection for synchronized cell division in simple multicellular organisms. J. Theor. Biol. 457. PMID: 30172691. DOI: 10.1016/j.jtbi.2018.08.038  PDF

471.      Pavlogiannis, A., Tkadlec, J., Chatterjee, K. & & Nowak, M.A. (2018). Strong Amplifiers of Natural Selection: Proofs. DOI: https://arxiv.org/abs/1802.02509  PDF

472.      Pavlogiannis, A., Tkadlec, J., Chatterjee, K. & Nowak, M.A. (2018). Construction of arbitrarily strong amplifiers of natural selection using evolutionary graph theory. Nat. Commun. Biol. 1(1): 71. PMID: 30271952. DOI: 10.1038/s42003-018-0078-7  PDF & SI

473.      Priklopil, T., Chatterjee, K. & Nowak, M.A. (2018). Optional interactions and suspicious behavior facilitates trustful cooperation in prisoners dilemma. J. Theor. Biol. 433: 64-72. PMID: 28867224. DOI: 10.1016/j.jtbi.2017.08.025  PDF & SI

474.      Reiter, J., Hilbe, C., Rand, D., Chatterjee, K. & Nowak, M.A. (2018). Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness. Nat. Commun. 9(555). PMID: 29416030. DOI: 10.1038/s41467-017-02721-8  PDF & SI

475.      Reiter, J. G., Makohon-Moore, A. P., Gerold, J. M., Heyde, A., Attiyeh, M. A., Kohutek, Z. A., Tokheim, C. J., Brown, A., DeBlasio, R. M., Niyazov, J., Zucker, A., Karchin, R., Zinkler, K. W., Iacobuzio-Donahue, C.A., Vogelstein, B. & Nowak, M.A. (2018). Minimal functional driver gene heterogeneity among untreated metastases. Science 361(6404): 1033-1037. PMID: 30190408. DOI: 10.1126/science.aat7171  PDF & SI

476.      Sinai, S., Olejarz, J., Neagu, I. A. & Nowak, M.A. (2018). Primordial Sex Facilitates the Emergence of Evolution. J. Royal Soc. Interface 15 (139): 20180003. PMID: 29491181. DOI: 10.1098/rsif.2018.0003  PDF

 

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2019

477.      Allen, B., Lippner, G. & Nowak, M. A. (2019). Evolutionary Games on Isothermal Graphs. Nat. Commun 10: 5107. PMID: 31704922. DOI: 10.1038/s41467-019-13006-7

478.      Craig, M., Kaveh, K., Woosley, A., Brown, A.S., Goldman, D., Eton, E., Mehta, R.M., Dhawan, A., Arai, K., Rahman, M.M., Chen, S., Nowak, M.A. & Goldman, A. (2019). Cooperative adaptation to therapy (CAT) confers resistance in heterogeneous non-small cell lung cancer. PLOS Comput. Biol 15(8): e1007278. PMID: 31449515. DOI: 10.1371/journal.pcbi.1007278  PDF

479.      Fotouhi, B., Momenti, N., Allen, B. & Nowak, M.A. (2019). Evolution of cooperation on large networks with community structure. J. Royal Soc. Interface 16: 20180677. PMID: 30862280. DOI: 10.1098/rsif.2018.0677  PDF

480.      Gruber, M., Bozic, I., Leshchiner, I., Livitz, D., Stevenson, K., Rassenti, L., Rosebrock, D., Taylor-Weiner, A., Olive, O., Goyetche, R., Fernandes, S.M., Sun, J., Stewart, C., Wong, A., Cibulskis, C., Zhang, W., Reiter, J.G., Gerold, J.M., Gribben, J.G., Rai, K.R., Keating, M.J., Brown, J.R., Neuberg, D., Kipps, T.J., Nowak, M.A., Getz, G. & Wu, C.J. (2019). Growth dynamics in naturally progressing chronic lymphocytic leukaemia. Nature 570: 474–479. PMID: 31142838. DOI: 10.1038/s41586-019-1252-x  PDF

481.      Hauser, O.P., Hilbe, C., Chatterjee, K. & Nowak, M.A. (2019). Social dilemmas among unequals. Nature 572524–527. PMID: 31413366. DOI: 10.1038/s41586-019-1488-5  PDF

482.      Heyde, A., Reiter, J.G., Naxerova, K. & Nowak, M.A. (2019). Consecutive seeding and transfer of genetic diversity in metastasis. Proc. Natl. Acad. Sci. U.S.A  116: 14129-14137. PMID: 31239334. DOI: 10.1073/pnas.1819408116  PDF

483.      Kaveh, K., McAvoy, A. & Nowak, M.A.(2019). Environmental fitness heterogeneity in the Moran process. Royal Soc. Open Sci. 5: 181661. PMID: 30800394. DOI: http://dx.doi.org/10.1098/rsos.181661 PDF

484.      McAvoy, A. & Nowak, M.A. (2019). Reactive learning strategies for iterated games. Proc. Royal Soc. A 475: 20180819. PMID: 31007557. PMCID: PMC6451968. DOI: 10.1098/rspa.2018.0819  PDF

485.      Reiter, J.G., Baretti, M., Gerold, J.M., Makohon-Moore, A.P., Daud, A., Iacobuzio-Donahue, C.A., Azad, N.S., Kinzler, K.W., Nowak, M.A. & Vogelstein, B. (2019). An analysis of genetic heterogeneity in untreated cancers. Nat. Rev. Cancer 19: 639-650.  PMID: 31455892. DOI: 10.1038/s41568-019-0185-x PDF

486.      Su, Q., McAvoy, A., Wang, L. & Nowak, M.A. (2019). Evolutionary dynamics with stochastic game transitions. Proc. Natl. Acad. Sci. U.S.A. 116: 25398-25404. PMID: 31044163. DOI: 10.1073/pnas.1908936116

487.      Tkadlec, J., Pavlogiannis, A., Chatterjee, K. & Nowak, M.A. (2019). Population structure determines the tradeoff between fixation probability and fixation time. Nat. Commun. Biol. 2: 138. PMID: 31044163. DOI: 10.1038/s42003-019-0373-y PDF

488.      Veller, C., Kleckner, N. & Nowak, M.A. (2019). A rigorous measure of genome-wide genetic shuffling that takes into account crossover positions and Mendel's second law. Proc. Natl. Acad. Sci. U.S.A. 116: 1659-1668. PMID: 30635424. DOI: 10.1073/pnas.1817482116  PDF      

489.      Wakeley, J. & Nowak, M.A. (2019). A two-player iterated survival game. Theor. Popul. Biol. 125: 38-55. PMID: 30552911. DOI: 10.1016/j.tpb.2018.12.001  PDF

 

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2020

490.      Madison, K., Sinai, S., Ferrari, R., Nowak, M.A. (2020). Turbulent coherent structures and early life below the Kolmogorov scale. Nat. Commun. 11: 2192.  PMID: 32366844. PMCID: PMC7198613. DOI: 10.1038/s41467-020-15780-1

491.      Sakamoto, H., Attiyeh, M., Gerold,  J. M.,  Makohon-Moore, A.P., Hayashi, A., Hong, J., Kappagantula, R., Zhang, L., Melchor,  J. P., Reiter, J. G., Heyde, A., Bielski, C. M., Penson,  A. V., Gonen, M., Chakravarty, D., O'Reilly, E.M, Wood, L. D., Hruban, R. H., Nowak, M. A., Socci, N. D., Taylor, B. S., & Iacobuzio-Donahue, C. A. (2020). The Evolutionary Origins of Recurrent Pancreatic Cancer. Cancer Discovery. PMID: 32193223. DOI: 10.1158/2159-8290.CD-19-1508

492.      Tkadlec, J., Pavlogiannis, A., Chatterjee, K. & Nowak, M.A. (2020). Limits on amplifiers of natural selection under death-Birth updating. PLoS Comput. Biol. 16: e1007494. PMID: 31951609. DOI: 10.1371/journal.pcbi.1007494

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Forthcoming

493.      Kaveh, K., McAvoy, A., Chatterjee, K., & Nowak, M. A. (in review). Selection dynamics on chromatic graphs. 

494.      McAvoy, A., Allen, B., Nowak, M.A. (accepted). Social goods dilemmas in heterogeneous societies. Nat. Hum. Behav. https://arxiv.org/abs/1909.10139

495.      Schmid, L., Hilbe, C., Chatterjee, K. & Nowak, M.A. (in review). A unified framework of direct and indirect reciprocity. 

 

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